RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 UBAC2Q8NBM4 344 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 BPIFB6Q8NFQ5 453 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 LSM10Q969L4 123 aaKnown RBP10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 MS4A6AQ9H2W1 248 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 TMEM140Q9NV12 185 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 CELA1Q9UNI1 258 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 NACAE9PAV3 2078 aa10.25□□□□□ -0.77
PRPF40A-211ENST00000493468 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 IGHV3-21A0A0B4J1V1 117 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 IFNA10P01566 189 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 GNAO1P09471 354 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 RPS25P62851 125 aaKnown RBP10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 Q8N1X5 172 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 OR1L8Q8NGR8 309 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 GPHA2Q96T91 129 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 VSIRQ9H7M9 311 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 PLEKHA2Q9HB19 425 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 ELF5Q9UKW6 265 aaPredicted RBP10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 TBC1D24Q9ULP9 559 aa10.24□□□□□ -0.77
PRPF40A-211ENST00000493468 C16orf90A8MZG2 172 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 YIF1AO95070 293 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 IFNA21P01568 189 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 IFNA17P01571 189 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 C4BPBP20851 252 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 CATR1Q13166 79 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 HACD4Q5VWC8 232 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 FAM210BQ96KR6 192 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 TXN2Q99757 166 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 GINS3Q9BRX5 216 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 NXF2Q9GZY0 626 aaKnown RBP10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 TMEM14BQ9NUH8 114 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 COMMD9Q9P000 198 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 ANXA10Q9UJ72 324 aa10.23□□□□□ -0.77
PRPF40A-211ENST00000493468 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 TEX50A0A1B0GTY4 177 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 IFITM5A6NNB3 132 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 TNFSF12O43508 249 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 EIF4EP06730 217 aaKnown RBP10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 NPY1RP25929 384 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 RNF212Q495C1 297 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 CADM3Q8N126 398 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 FAM24BQ8N5W8 94 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 DUSP18Q8NEJ0 188 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 DMBX1Q8NFW5 382 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 GRAMD2BQ96HH9 432 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
PRPF40A-211ENST00000493468 IGHV3OR16-13A0A075B7E8 117 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 IGHV3-74A0A0B4J1X5 117 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 SULT1C2O00338 296 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 PDCD5O14737 125 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 ST8SIA3O43173 380 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 FABP5Q01469 135 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 CDNFQ49AH0 187 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 OR1P1Q8NH06 330 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 SECTM1Q8WVN6 248 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 ST8SIA2Q92186 375 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 SCRT1Q9BWW7 348 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 ACOT13Q9NPJ3 140 aa10.21□□□□□ -0.77
PRPF40A-211ENST00000493468 TRAV1-2A0A0B4J238 106 aa10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 MFAP4P55083 255 aa10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 ZNF767PQ75MW2 155 aa10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 OR13F1Q8NGS4 319 aa10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 NUDCD2Q8WVJ2 157 aa10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 ATG5Q9H1Y0 275 aa10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 DMBT1Q9UGM3 2413 aaPredicted RBP10.2□□□□□ -0.78
PRPF40A-211ENST00000493468 MARCH11A6NNE9 402 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 I3L2K1 104 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 OR10A3P58181 314 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 ARPC4P59998 168 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 ERVK-16P61578 105 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 MLLT11Q13015 90 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 UBE2UQ5VVX9 321 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 LILRB2Q8N423 598 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 TMEM56Q96MV1 263 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 TMEM231Q9H6L2 316 aa10.19□□□□□ -0.78
PRPF40A-211ENST00000493468 TMEM235A6NFC5 223 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 PTGES3LE9PB15 166 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 K7EQG2 157 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 PPYP01298 95 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 FCGR2CP31995 323 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 RCN1Q15293 331 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 TOMM20LQ6UXN7 152 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 SLC25A46Q96AG3 418 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 HINT2Q9BX68 163 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 CCDC90BQ9GZT6 254 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 CLEC5AQ9NY25 188 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 RABAC1Q9UI14 185 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 OR51B2Q9Y5P1 312 aa10.18□□□□□ -0.78
PRPF40A-211ENST00000493468 SSX5O60225 188 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 GNG7O60262 68 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 SCGNO76038 276 aa10.17□□□□□ -0.78
PRPF40A-211ENST00000493468 HSMCR30P0CW71 290 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms