RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 TRAPPC1Q9Y5R8 145 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 TCRBV4S1A1TA0A5B7 111 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 SLC25A5P05141 298 aaKnown RBP5.18□□□□□ -1.58
NF1-215ENST00000493220 OR5AL1P0C617 328 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 ORM2P19652 201 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 CR1LQ2VPA4 569 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 DGAT2L7PQ6IED9 249 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 UQCC3Q6UW78 93 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 NPVFQ9HCQ7 196 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 RABAC1Q9UI14 185 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 ELF5Q9UKW6 265 aaPredicted RBP5.18□□□□□ -1.58
NF1-215ENST00000493220 KNTC1P50748 2209 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 PLA2G10O15496 165 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 PSPNO60542 156 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 TCTAP57738 103 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 CKS1BP61024 79 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 ERVK11-1P61568 191 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 QRFPP83859 136 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 GAMTQ14353 236 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 Q6ZSR3 168 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 SMIM8Q96KF7 97 aa5.18□□□□□ -1.58
NF1-215ENST00000493220 UPK2O00526 184 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 SPINK4O60575 86 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 LY6HO94772 140 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 NAPSAO96009 420 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 IGHV4-39P01824 125 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 TFF1P04155 84 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 HIST1H1EP10412 219 aaKnown RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 KLRD1Q13241 179 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 OR4X1Q8NH49 305 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 PRSS3P2Q8NHM4 247 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 BET1LQ9NYM9 111 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 TCF19Q9Y242 345 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 WSB1Q9Y6I7 421 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 APELAP0DMC3 54 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 ZP3P21754 424 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 EWSR1Q01844 656 aaKnown RBP eCLIP5.17□□□□□ -1.58
NF1-215ENST00000493220 MRPL23Q16540 153 aaKnown RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 TOMM20LQ6UXN7 152 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 RNASEH2CQ8TDP1 164 aaKnown RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 ZNF257Q9Y2Q1 563 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 RNASEK-C17orf49H0YIS7 233 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 HYPMO75409 117 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 DEDDO75618 318 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 ZNF660Q6AZW8 331 aaPredicted RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 ZNF429Q86V71 674 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 TMEM37Q8WXS4 190 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 COQ2Q96H96 371 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 PRR13Q9NZ81 148 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 NAT8BQ9UHF3 227 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 UFC1Q9Y3C8 167 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 PSMB11A5LHX3 300 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 PKIAP61925 76 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 DLK1P80370 383 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 C8orf31Q8N9H6 132 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 GALNT14Q96FL9 552 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 NEU1Q99519 415 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 GGACTQ9BVM4 153 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 FOXA2Q9Y261 457 aaPredicted RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 RNF114Q9Y508 228 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 C17orf98A8MV24 154 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 EIF3GO75821 320 aaKnown RBP eCLIP5.17□□□□□ -1.58
NF1-215ENST00000493220 SAA1P0DJI8 122 aaPredicted RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 COL8A1P27658 744 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 RSPO1Q2MKA7 263 aaPredicted RBP5.17□□□□□ -1.58
NF1-215ENST00000493220 HCP5Q6MZN7 132 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 WDR86Q86TI4 376 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 OR10G4Q8NGN3 311 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 OR10G9Q8NGN4 311 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 OR10G7Q8NGN6 311 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 BLNKQ8WV28 456 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 MS4A10Q96PG2 267 aa5.17□□□□□ -1.58
NF1-215ENST00000493220 SAA4P35542 130 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 PSMB2P49721 201 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 C12orf54Q6X4T0 127 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 LHFPL4Q7Z7J7 247 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 LINC00311Q8N616 119 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 TRAV41A0A0B4J266 112 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 DUTP33316 252 aaKnown RBP5.16□□□□□ -1.58
NF1-215ENST00000493220 C19orf24Q9BVV8 132 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 MANBALQ9NQG1 85 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 TMEM56-RWDD3S4R434 201 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 H3BUX3 64 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 C19orf84I3L1E1 186 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 CA2P00918 260 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 LHBP01229 141 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 PSG9Q00887 426 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 EBLN2Q6P2I7 272 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 ZNF479Q96JC4 524 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 TMEM204Q9BSN7 226 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 C15orf61A6NNL5 157 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 CD8AP01732 235 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 LOXP28300 417 aaPredicted RBP5.16□□□□□ -1.58
NF1-215ENST00000493220 DLX6P56179 175 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 SEC61GP60059 68 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 ANKRD55Q3KP44 614 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 OR8I2Q8N0Y5 310 aa5.16□□□□□ -1.58
NF1-215ENST00000493220 PHYHIPLQ96FC7 376 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms