RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CEBPZOSA8MTT3 80 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 CRYBA1P05813 215 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 FOLR2P14207 255 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 HSPE1P61604 102 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 BAXQ07812 192 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 C15orf54Q8N8G6 183 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 NANPQ8TBE9 248 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 METTL1Q9UBP6 276 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 WSB1Q9Y6I7 421 aa11.27□□□□□ -0.61
PDZRN3-210ENST00000492909 UMAD1C9J7I0 102 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 NBR2O15453 112 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 TMEM50AO95807 157 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 CRYGBP07316 175 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 FBP1P09467 338 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 IAPPP10997 89 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 PAX9P55771 341 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 TAS2R30P59541 319 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 RPL23AP62750 156 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 CLINT1Q14677 625 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 OR5B3Q8NH48 314 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 DTD1Q8TEA8 209 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 ZDHHC16Q969W1 377 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 COMMD5Q9GZQ3 224 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 MEGF9Q9H1U4 602 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 BIN3Q9NQY0 253 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 TPSG1Q9NRR2 321 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 KIAA1456Q9P272 454 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 SIGLEC9Q9Y336 463 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 RRHO14718 337 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 TMEM11P17152 192 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 DYNLT3P51808 116 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 PLGLAQ15195 96 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 Q71RC1 249 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 Q8N6K4 173 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 NPBQ8NG41 125 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 PSENENQ9NZ42 101 aa11.26□□□□□ -0.61
PDZRN3-210ENST00000492909 PLXNB1O43157 2135 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 TEX50A0A1B0GTY4 177 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 NDUFA3O95167 84 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 LY86O95711 162 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 FSHBP01225 129 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 KRTAP1-1Q07627 177 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 FBLN7Q53RD9 439 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 AWAT1Q58HT5 328 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 FAM120AOSQ5T036 256 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 OR5C1Q8NGR4 320 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 SLC35B3Q9H1N7 401 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 TUBA4BQ9H853 241 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
PDZRN3-210ENST00000492909 ACTL6BO94805 426 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 OPN1MWP04001 364 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 OPN1MW2P0DN77 364 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 OPN1MW3P0DN78 364 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 MYOD1P15172 320 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 MAS1LP35410 378 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 PRSS8Q16651 343 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 ETV3LQ6ZN32 361 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 HINT2Q9BX68 163 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 HIPK2Q9H2X6 1198 aa11.24□□□□□ -0.61
PDZRN3-210ENST00000492909 C7orf77A4D0Y5 90 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 NCBP2LA6PVI3 153 aaKnown RBP11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 H3BP45 60 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 LY6G6DO95868 133 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 AKIRIN2Q53H80 203 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 TEX29Q8N6K0 151 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 SSX3Q99909 188 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 PLEKHA3Q9HB20 300 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 HEYLQ9NQ87 328 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 C1RLQ9NZP8 487 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 SOX21Q9Y651 276 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 CD5LO43866 347 aa11.23□□□□□ -0.61
PDZRN3-210ENST00000492909 CST7O76096 145 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms