RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 OTOSQ8NHW6 89 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 ANAPC16Q96DE5 110 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 SDSLQ96GA7 329 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 SLC35E1Q96K37 410 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 FAAP24Q9BTP7 215 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 RTL8AQ9BWD3 113 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 RBKSQ9H477 322 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 LRP12Q9Y561 859 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 MPC1Q9Y5U8 109 aa10.5□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF850A8MQ14 1090 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 GLRA1P23415 457 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 COX7A1P24310 79 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 HOXD3P31249 432 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-213ENST00000492506 PPP1CCP36873 323 aaKnown RBP10.49□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF121P58317 390 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-213ENST00000492506 UBE2G2P60604 165 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 GRB2P62993 217 aaKnown RBP10.49□□□□□ -0.73
HDAC3-213ENST00000492506 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
HDAC3-213ENST00000492506 COL10A1Q03692 680 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 BAXQ07812 192 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 OR5I1Q13606 314 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 GNMTQ14749 295 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 AADACL3Q5VUY0 350 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 DEGS2Q6QHC5 323 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 TEX43Q6ZNM6 134 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 FAM57BQ71RH2 274 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 H1FOOQ8IZA3 346 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-213ENST00000492506 OR5AU1Q8NGC0 362 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 OR4B1Q8NGF8 309 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 OR6N2Q8NGY6 317 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 SMIM12Q96EX1 92 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 AK3Q9UIJ7 227 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 URGCP-MRPS24S4R325 110 aa10.49□□□□□ -0.73
HDAC3-213ENST00000492506 A0A0U1RQV5 110 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 MAP1LC3B2A6NCE7 125 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 ODF3BA8MYP8 253 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 PRR32B1ATL7 298 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 ST8SIA3O43173 380 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 SYNGR1O43759 233 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 PF4V1P10720 104 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 CCL3L1P16619 93 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 DUSP1P28562 367 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-213ENST00000492506 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 LGALS4P56470 323 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 RPL23AP62750 156 aaKnown RBP10.48□□□□□ -0.73
HDAC3-213ENST00000492506 IL24Q13007 206 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 SPSB3Q6PJ21 355 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 TMEM182Q6ZP80 229 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-213ENST00000492506 CENPVQ7Z7K6 275 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-213ENST00000492506 LYPD6Q86Y78 171 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 OR2G3Q8NGZ4 309 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 SPIN2AQ99865 258 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 SPIN2BQ9BPZ2 258 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 RTBDNQ9BSG5 229 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-213ENST00000492506 MAP1LC3BQ9GZQ8 125 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 TAS2R4Q9NYW5 299 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 HSPB7Q9UBY9 170 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
HDAC3-213ENST00000492506 LSM5Q9Y4Y9 91 aaKnown RBP10.48□□□□□ -0.73
HDAC3-213ENST00000492506 SOX15O60248 233 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 FUT3P21217 361 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 DYNLT3P51808 116 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 CEBPGP53567 150 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 DLX6P56179 175 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 RPL31P62899 125 aaKnown RBP10.47□□□□□ -0.73
HDAC3-213ENST00000492506 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF66Q6ZN08 573 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 CD177Q8N6Q3 437 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 OR4D6Q8NGJ1 314 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 RNF133Q8WVZ7 376 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 TP53RKQ96S44 253 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 AMELYQ99218 206 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 OR10A2Q9H208 303 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 OR51I2Q9H344 312 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 KLHDC2Q9Y2U9 406 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 TBL2Q9Y4P3 447 aaKnown RBP10.47□□□□□ -0.73
HDAC3-213ENST00000492506 R4GMQ9 66 aa10.47□□□□□ -0.73
HDAC3-213ENST00000492506 HUWE1Q7Z6Z7 4374 aaKnown RBP10.47□□□□□ -0.73
HDAC3-213ENST00000492506 DNAH1Q9P2D7 4330 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 C17orf98A8MV24 154 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-213ENST00000492506 TMEM14DPA8MWL7 114 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 F6UZH7 168 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 HRASP01112 189 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 PF4P02776 101 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 PFN1P07737 140 aaKnown RBP10.46□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF705DP0CH99 300 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-213ENST00000492506 ZNF705BP0CI00 300 aaPredicted RBP10.46□□□□□ -0.73
HDAC3-213ENST00000492506 HIST1H1DP16402 221 aaKnown RBP10.46□□□□□ -0.73
HDAC3-213ENST00000492506 BMI1P35226 326 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 GPM6AP51674 278 aa10.46□□□□□ -0.73
HDAC3-213ENST00000492506 CNN1P51911 297 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms