RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 RCC2Q9P258 522 aaKnown RBP3.72□□□□□ -1.81
TRA2B-215ENST00000492417 UQCR10Q9UDW1 63 aa3.72□□□□□ -1.81
TRA2B-215ENST00000492417 A0A1B0GV72 72 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TRGC1P0CF51 173 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 STAG3L2P0CL84 134 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 SLC25A16P16260 332 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 FAM3BP58499 235 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 DSCR9P59020 149 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM267Q0VDI3 215 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 DAZAP2Q15038 168 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 CR1LQ2VPA4 569 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 Q56UQ5 140 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 RUSC1-AS1Q66K80 236 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TBC1D26Q86UD7 250 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 BPIFA4PQ86YQ2 179 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 CYB561D1Q8N8Q1 229 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 OR4B1Q8NGF8 309 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 OR4A4PQ8NGN8 299 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF418Q8TF45 676 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 SMIM12Q96EX1 92 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 NAA60Q9H7X0 242 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 ZNRD1Q9P1U0 126 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 LINC00527Q9UJ94 153 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 RPUSD1Q9UJJ7 312 aaKnown RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 PCSK5Q92824 1860 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 MAP1AP78559 2803 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 SNURFLB1AK76 121 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 KCNAB3O43448 404 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 G6PCP35575 357 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 ZP1P60852 638 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 SLC38A11Q08AI6 406 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 HERPUD1Q15011 391 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 EFNB3Q15768 340 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 IZUMO4Q1ZYL8 232 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM200BQ69YZ2 307 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 ACSM6Q6P461 480 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM219Q86XT9 240 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 OR10G4Q8NGN3 311 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 OR10G9Q8NGN4 311 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 OR10G7Q8NGN6 311 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM186Q96B77 213 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 SDHCQ99643 169 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 GINS3Q9BRX5 216 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 JKAMPQ9P055 326 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 DPM3Q9P2X0 92 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 A0A0A6YYD4 124 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 KBTBD11-OT1A0A1B0GTJ5 212 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 IFITM10A6NMD0 228 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 CSN3P07498 182 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 MSMBP08118 114 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 ATP6V0CP27449 155 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 IER3P46695 156 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 P2RY1P47900 373 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 CDC34P49427 236 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 DYNLT3P51808 116 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TCL1AP56279 114 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 TMEM42Q69YG0 159 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 SLC35E4Q6ICL7 350 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 FAM53AQ6NSI3 398 aaPredicted RBP3.71□□□□□ -1.82
TRA2B-215ENST00000492417 CCDC144NLQ6NUI1 221 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 C12orf54Q6X4T0 127 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 VMO1Q7Z5L0 202 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 HOGA1Q86XE5 327 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 MRGPRFQ96AM1 343 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 GAFA1Q96PS6 74 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 C1RLQ9NZP8 487 aa3.71□□□□□ -1.82
TRA2B-215ENST00000492417 C3orf85A0A1B0GTC6 90 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 SH2D7A6NKC9 451 aaPredicted RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 IGKV1D-33P01593 117 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 IGKV1-33P01594 117 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 HLA-GP17693 338 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 COMPP49747 757 aaPredicted RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 GNG4P50150 75 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 RPEL1Q2QD12 228 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 SGMS2Q8NHU3 365 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 R3HDM4Q96D70 268 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 OR4C12Q96R67 309 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 COA4Q9NYJ1 87 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 IGKV3-7A0A075B6H7 116 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 ISLRO14498 428 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 OR2A4O95047 310 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 CTSDP07339 412 aaPredicted RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 DANCRP0C864 163 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 SRD5A1P18405 259 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 HOXA5P20719 270 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 ERHP84090 104 aaKnown RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 SPATA45Q537H7 98 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 MRPL54Q6P161 138 aaKnown RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 ZNF788Q6ZQV5 615 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 LIAT1Q6ZQX7 453 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 LINC01356Q8N9X3 169 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 OR4S2Q8NH73 311 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 MRPL30Q8TCC3 161 aaKnown RBP3.7□□□□□ -1.82
TRA2B-215ENST00000492417 RPS4Y2Q8TD47 263 aa3.7□□□□□ -1.82
TRA2B-215ENST00000492417 MISP3Q96FF7 219 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms