RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 SLA2Q9H6Q3 261 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 ZC4H2Q9NQZ6 224 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 THYN1Q9P016 225 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 F11RQ9Y624 299 aaKnown RBP7.66□□□□□ -1.18
USP54-214ENST00000492357 TNCP24821 2201 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 NOTCH2Q04721 2471 aa7.66□□□□□ -1.18
USP54-214ENST00000492357 NBPF19A0A087WUL8 3843 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 IGHV7-81A0A0B4J1V7 117 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 RPS10-NUDT3A0A1W2PQS6 291 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 IGSF23A1L1A6 192 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 MSGN1A6NI15 193 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 CGB1A6NKQ9 187 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 C15orf62A8K5M9 175 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 AP4M1O00189 453 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 RNASE2P10153 161 aaKnown RBP7.65□□□□□ -1.18
USP54-214ENST00000492357 IAPPP10997 89 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 TPT1P13693 172 aaKnown RBP7.65□□□□□ -1.18
USP54-214ENST00000492357 CTRB1P17538 263 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 CD24P25063 80 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
USP54-214ENST00000492357 WT1-ASQ06250 92 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 PJVKQ0ZLH3 352 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 FAM209BQ5JX69 171 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 SPANXN5Q5MJ07 72 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 CTRB2Q6GPI1 263 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 CSPG4Q6UVK1 2322 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 ATP5SQ99766 215 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 TEX15Q9BXT5 2789 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 NPFFR1Q9GZQ6 430 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 TPSG1Q9NRR2 321 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 KCNIP2Q9NS61 270 aa7.65□□□□□ -1.18
USP54-214ENST00000492357 TET2Q6N021 2002 aaPredicted RBP7.64□□□□□ -1.19
USP54-214ENST00000492357 FAM24AA6NFZ4 105 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 PMS2P5A8MQ11 134 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 PRSS46E5RG02 174 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 FCN1O00602 326 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 LY6G6DO95868 133 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 IGHV4-59P01825 116 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 OR13C7P0DN81 318 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 SRD5A1P18405 259 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 CLEC9AQ6UXN8 241 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 ETV3LQ6ZN32 361 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 ZNF767PQ75MW2 155 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 BCL6BQ8N143 479 aaPredicted RBP7.64□□□□□ -1.19
USP54-214ENST00000492357 Q8N2B8 174 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 OR5C1Q8NGR4 320 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 GRPEL2Q8TAA5 225 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 FAM110DQ8TAY7 271 aaPredicted RBP7.64□□□□□ -1.19
USP54-214ENST00000492357 C22orf15Q8WYQ4 148 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 GNPNAT1Q96EK6 184 aaPredicted RBP7.64□□□□□ -1.19
USP54-214ENST00000492357 ZNF48Q96MX3 618 aaPredicted RBP7.64□□□□□ -1.19
USP54-214ENST00000492357 OR4C12Q96R67 309 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 TMEM147Q9BVK8 224 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 HINT2Q9BX68 163 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 PRSS22Q9GZN4 317 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 ARV1Q9H2C2 271 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 FBXL17Q9UF56 701 aa7.64□□□□□ -1.19
USP54-214ENST00000492357 FLNBO75369 2602 aaKnown RBP7.64□□□□□ -1.19
USP54-214ENST00000492357 A0A1B0GW64 132 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 FBXO24O75426 580 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 SCGB2A1O75556 95 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 IFNA7P01567 189 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 IFNA5P01569 189 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 AMY1AP04745 511 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 IFNA4P05014 189 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 METTL15P1P0C7V9 234 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 FAM157CP0CG43 387 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 FCGR2BP31994 310 aaPredicted RBP7.63□□□□□ -1.19
USP54-214ENST00000492357 NKX2-5P52952 324 aaPredicted RBP7.63□□□□□ -1.19
USP54-214ENST00000492357 HILS1P60008 231 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 GNB1P62873 340 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 NHLH2Q02577 135 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 CD69Q07108 199 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 SLC38A11Q08AI6 406 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 C19orf54Q5BKX5 351 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 SLC35E3Q7Z769 313 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 BAP18Q8IXM2 172 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 LILRB2Q8N423 598 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 LRRC20Q8TCA0 184 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 ABHD5Q8WTS1 349 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 P2RX4Q99571 388 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 PSMG3Q9BT73 122 aaPredicted RBP7.63□□□□□ -1.19
USP54-214ENST00000492357 NPVFQ9HCQ7 196 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 UQCC1Q9NVA1 299 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 GAR1Q9NY12 217 aaKnown RBP7.63□□□□□ -1.19
USP54-214ENST00000492357 TIMM9Q9Y5J7 89 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 OTOGQ6ZRI0 2925 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 CSMD2Q7Z408 3487 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 ZANQ9Y493 2812 aa7.63□□□□□ -1.19
USP54-214ENST00000492357 E7EUB6 86 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 H3BP45 60 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 TRIM77I1YAP6 450 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 RGS13O14921 159 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 HOXA3O43365 443 aaPredicted RBP7.62□□□□□ -1.19
USP54-214ENST00000492357 CST7O76096 145 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 NXPH3O95157 252 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 RNASE1P07998 156 aaKnown RBP7.62□□□□□ -1.19
USP54-214ENST00000492357 SEC11BP0C7V7 166 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 PAX6P26367 422 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 SERF2P84101 59 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms