RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TMEM178BH3BS89 294 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 DVL1O14640 695 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 PPIAL4FP0DN26 164 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 KIR2DS2P43631 304 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 CDX1P47902 265 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-220ENST00000492280 OR10X1Q8NGY0 326 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 TMEM106BQ9NUM4 274 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 PPIAL4AQ9Y536 164 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 LINC00312Q9Y6C7 94 aa10.13□□□□□ -0.79
HMGN1-220ENST00000492280 IGHV3-21A0A0B4J1V1 117 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 PHOX2AO14813 284 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 PPP1R2P9O14990 202 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 STAG3L2P0CL84 134 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 STAG3L3P0CL85 134 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 RPP30P78346 268 aaKnown RBP10.12□□□□□ -0.79
HMGN1-220ENST00000492280 DMRTC2Q8IXT2 367 aaPredicted RBP10.12□□□□□ -0.79
HMGN1-220ENST00000492280 HIST3H2BBQ8N257 126 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 TMEM37Q8WXS4 190 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 ACY3Q96HD9 319 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 FUT9Q9Y231 359 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 UPK2O00526 184 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 HRASP01112 189 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 OR10J1P30954 320 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 CDSNQ15517 529 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 RTL8BQ17RB0 113 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 MORN5Q5VZ52 161 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 RUSC1-AS1Q66K80 236 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 OR10A7Q8NGE5 316 aa10.12□□□□□ -0.79
HMGN1-220ENST00000492280 RNASE6Q93091 150 aaKnown RBP10.12□□□□□ -0.79
HMGN1-220ENST00000492280 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 FAM90A9PA6NNJ1 464 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 SHISA9B4DS77 424 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 OR5B12Q96R08 314 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 GAR1Q9NY12 217 aaKnown RBP10.11□□□□□ -0.79
HMGN1-220ENST00000492280 H0YJW9 148 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 S100A2P29034 98 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 GCHFRP30047 84 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 C3orf36Q3SXR2 165 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 C9orf152Q5JTZ5 239 aa10.11□□□□□ -0.79
HMGN1-220ENST00000492280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-220ENST00000492280 SLC17A3O00476 420 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 PRB4P10163 310 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-220ENST00000492280 CNTFRP26992 372 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 LOXP28300 417 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-220ENST00000492280 PRCDQ00LT1 54 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 GAMTQ14353 236 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 TMEM242Q9NWH2 141 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 TRAV20A0A0B4J274 112 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 PPP5D1E7EU14 171 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 ENSAO43768 121 aaKnown RBP10.1□□□□□ -0.79
HMGN1-220ENST00000492280 SLC25A17O43808 307 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 OR7C2O60412 319 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 FRMD6-AS1P0C7T7 363 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 OR5I1Q13606 314 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 PSG5Q15238 335 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-220ENST00000492280 CTDSP1Q9GZU7 261 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 GAL3ST2Q9H3Q3 398 aa10.1□□□□□ -0.79
HMGN1-220ENST00000492280 MRPL36Q9P0J6 103 aaKnown RBP10.1□□□□□ -0.79
HMGN1-220ENST00000492280 NDUFB3O43676 98 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 LINC00869P0C866 280 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 NABP2Q9BQ15 211 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 SPG11Q96JI7 2443 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 MPDU1O75352 247 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 CXorf1O96002 111 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 RNASE2P10153 161 aaKnown RBP10.09□□□□□ -0.79
HMGN1-220ENST00000492280 IL3RAP26951 378 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 TMPRSS3P57727 454 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 PMS2P11Q13670 270 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 ZNF833PQ6ZTB9 187 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 OCC1Q8TAD7 63 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 COMMD5Q9GZQ3 224 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
HMGN1-220ENST00000492280 K7EN84 100 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 DLL1O00548 723 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 ITGB1BP1O14713 200 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 SPINK4O60575 86 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 APOA2P02652 100 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 HCP5Q6MZN7 132 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 CORO2AQ92828 525 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 RAB1CQ92928 201 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 ADTRPQ96IZ2 230 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 KCNIP2Q9NS61 270 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 CGB1A6NKQ9 187 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 K7ENP7 123 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 SIAH2O43255 324 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 RPL8P62917 257 aaKnown RBP10.08□□□□□ -0.8
HMGN1-220ENST00000492280 PRR20EP86478 221 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 PRR20CP86479 221 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 PRR20DP86480 221 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 PRR20BP86481 221 aa10.08□□□□□ -0.8
HMGN1-220ENST00000492280 PRR20AP86496 221 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms