RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BTNL8Q6UX41 500 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 OR2C3Q8N628 320 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 ZNF114Q8NC26 417 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 OR52B4Q8NGK2 314 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 OR10C1Q96KK4 312 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 CHRDL1Q9BU40 450 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 GGTLC1Q9BX51 225 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 C21orf62Q9NYP8 219 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 LOC102724200A0A096LPH7 203 aaPredicted RBP6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 C15orf61A6NNL5 157 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 SCAF4O95104 1147 aaKnown RBP6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 RPA2P15927 270 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 ELK1P19419 428 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 HLA-DMAP28067 261 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 RND3P61587 244 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 NCS1P62166 190 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 LSM3P62310 102 aaKnown RBP6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 SLC25A24Q6NUK1 477 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 Q6ZWC4 215 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 LHFPL1Q86WI0 220 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 TMEM56Q96MV1 263 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 TSC22D3Q99576 134 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 TXN2Q99757 166 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 FUNDC2Q9BWH2 189 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 NSG2Q9Y328 171 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 OR51B2Q9Y5P1 312 aa6.22□□□□□ -1.41
SMARCB1-207ENST00000491967 IGHV3-35A0A0C4DH35 117 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 KIR2DL5BA0A0G2JN68 375 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 KIR2DL5BA0A0G2JPC4 375 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 SMIM31A0A1B0GVY4 71 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 OR2T8A6NH00 312 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 UBE2CO00762 179 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 SNAPC5O75971 98 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 RCVRNP35243 200 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 HSPE1P61604 102 aaKnown RBP6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 PRCDQ00LT1 54 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 CTF1Q16619 201 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 ODF3L2Q3SX64 289 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 FAM90A2PQ658T7 463 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 RBPMS2Q6ZRY4 209 aaKnown RBP6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 TBC1D26Q86UD7 250 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 SLC38A6Q8IZM9 456 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 KIR2DL5AQ8N109 375 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 KIR2DL5BQ8NHK3 375 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 VCX3AQ9NNX9 186 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 SMPXQ9UHP9 88 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 SELENOKQ9Y6D0 94 aa6.21□□□□□ -1.42
SMARCB1-207ENST00000491967 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 CHEK1O14757 476 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 TBPP20226 339 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 RORCP51449 518 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 VBP1P61758 197 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 TSPAN5P62079 268 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 AARDQ4LEZ3 155 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 PHLDA2Q53GA4 152 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 ZNF486Q96H40 463 aaPredicted RBP6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 NXF2Q9GZY0 626 aaKnown RBP6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 COMMD3Q9UBI1 195 aa6.2□□□□□ -1.42
SMARCB1-207ENST00000491967 A0A0B4J293 547 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 IGHV7-4-1A0A0J9YVY3 117 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 HPGDSO60760 199 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 GABARAPO95166 117 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 IGKV1-5P01602 117 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 CD74P04233 296 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 S100GP29377 79 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 BMI1P35226 326 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 MFAP4P55083 255 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 RELQ04864 619 aaPredicted RBP6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 LAMTOR1Q6IAA8 161 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 H2BFWTQ7Z2G1 175 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 ARRDC1Q8N5I2 433 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 RNF183Q96D59 192 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 ABHD1Q96SE0 405 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 VSIRQ9H7M9 311 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 KLK11Q9UBX7 282 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 MTFP1Q9UDX5 166 aa6.19□□□□□ -1.42
SMARCB1-207ENST00000491967 IGHV3-21A0A0B4J1V1 117 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 OR4C46A6NHA9 309 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 NUPL2O15504 423 aaKnown RBP6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 SPRY2O43597 315 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 JTBO76095 146 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 MT-CO2P00403 227 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 CD5P06127 495 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 CTSDP07339 412 aaPredicted RBP6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 SMIM18P0DKX4 95 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 ZNF182P17025 639 aaPredicted RBP6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 APOC4P55056 127 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 CMC4P56277 68 aaPredicted RBP6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 EWSR1Q01844 656 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 BSXQ3C1V8 233 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 SNX29P2Q8IUI4 249 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 TMEM116Q8NCL8 245 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 OR4A16Q8NH70 328 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 TERB2Q8NHR7 220 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 MRGPRFQ96AM1 343 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 RNF2Q99496 336 aa6.18□□□□□ -1.42
SMARCB1-207ENST00000491967 RHPN1-AS1Q9BWJ2 59 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms