RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CRYGBP07316 175 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 SNCAP37840 140 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 EIF5AP63241 154 aaKnown RBP11.11□□□□□ -0.63
SMPD4-219ENST00000491128 PDLIM3Q53GG5 364 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-219ENST00000491128 OR5B3Q8NH48 314 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 FAM213BQ8TBF2 198 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 SCGB1C1Q8TD33 95 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
SMPD4-219ENST00000491128 ZNF257Q9Y2Q1 563 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-219ENST00000491128 CNIH1O95406 144 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 SLC25A16P16260 332 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 ZP3P21754 424 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 CD1BP29016 333 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 DSCR9P59020 149 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 WDR61Q9GZS3 305 aaKnown RBP11.11□□□□□ -0.63
SMPD4-219ENST00000491128 UQCC1Q9NVA1 299 aa11.11□□□□□ -0.63
SMPD4-219ENST00000491128 MDFIC2A0A1B0GVS7 189 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 NBR2O15453 112 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 FGF16O43320 207 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 DFFBO76075 338 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 FGF7P21781 194 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 SULT1A2P50226 295 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 ARHGDIBP52566 201 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
SMPD4-219ENST00000491128 KRTAP1-3Q8IUG1 177 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 TMEM231Q9H6L2 316 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 FKBP11Q9NYL4 201 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
SMPD4-219ENST00000491128 HMGB3O15347 200 aaKnown RBP11.1□□□□□ -0.63
SMPD4-219ENST00000491128 SEC11BP0C7V7 166 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 TMEM11P17152 192 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 LRRC75BQ2VPJ9 315 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-219ENST00000491128 KLF17Q5JT82 389 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-219ENST00000491128 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 TAF15Q92804 592 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMPD4-219ENST00000491128 CACFD1Q9UGQ2 172 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
SMPD4-219ENST00000491128 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
SMPD4-219ENST00000491128 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
SMPD4-219ENST00000491128 CAMLGP49069 296 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 EIF5AL1Q6IS14 154 aaKnown RBP11.09□□□□□ -0.63
SMPD4-219ENST00000491128 SSMEM1Q8WWF3 244 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 MALSU1Q96EH3 234 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 HABP2Q14520 560 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-219ENST00000491128 GCSAMLQ5JQS6 135 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 OR2T10Q8NGZ9 312 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 MARC2Q969Z3 335 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 TMEM147Q9BVK8 224 aa11.09□□□□□ -0.63
SMPD4-219ENST00000491128 BEX4Q9NWD9 120 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-219ENST00000491128 COMPP49747 757 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-219ENST00000491128 RAB11AP62491 216 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 DEFA5Q01523 94 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 LY6EQ16553 131 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 OR4A5Q8NH83 315 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
SMPD4-219ENST00000491128 C1orf159Q96HA4 380 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 P2RX4Q99571 388 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 IGLC7A0M8Q6 106 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 MFAP2P55001 183 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
SMPD4-219ENST00000491128 NDPQ00604 133 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 BCL6BQ8N143 479 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-219ENST00000491128 STPG2Q8N412 459 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 LINC01356Q8N9X3 169 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 ABHD5Q8WTS1 349 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 TNFRSF19Q9NS68 423 aa11.08□□□□□ -0.64
SMPD4-219ENST00000491128 TBL2Q9Y4P3 447 aaKnown RBP11.08□□□□□ -0.64
SMPD4-219ENST00000491128 GATA2P23769 480 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-219ENST00000491128 ERHP84090 104 aaKnown RBP11.07□□□□□ -0.64
SMPD4-219ENST00000491128 TMEM249Q2WGJ8 235 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 FAM96BQ9Y3D0 163 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 IGHV4-31P0DP07 118 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 RAB2AP61019 212 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 CCL20P78556 96 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 FXYD3Q14802 87 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 C5orf64Q2M2E5 130 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 ACSM6Q6P461 480 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 ACY3Q96HD9 319 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 NPCDR1Q9BY65 106 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 FNDC4Q9H6D8 234 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-219ENST00000491128 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
SMPD4-219ENST00000491128 MRPL36Q9P0J6 103 aaKnown RBP11.07□□□□□ -0.64
SMPD4-219ENST00000491128 S4R3C0 116 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms