RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 NPVFQ9HCQ7 196 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 ZNRD1Q9P1U0 126 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 FN1P02751 2386 aaKnown RBP8.28□□□□□ -1.08
HDAC3-210ENST00000490808 ARHGAP32A7KAX9 2087 aa8.28□□□□□ -1.08
HDAC3-210ENST00000490808 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 UBE2L5PA0A1B0GUS4 154 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 SRRM4A7MD48 611 aaKnown RBP8.27□□□□□ -1.09
HDAC3-210ENST00000490808 C15orf62A8K5M9 175 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 ODF3BA8MYP8 253 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 MSMBP08118 114 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 HNF1AP20823 631 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 PLGLAQ15195 96 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-210ENST00000490808 SPINK9Q5DT21 86 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 ETFRF1Q6IPR1 90 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 BTNL8Q6UX41 500 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 CENPVQ7Z7K6 275 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-210ENST00000490808 OR2T10Q8NGZ9 312 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 LYPD6BQ8NI32 183 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 MALSU1Q96EH3 234 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 SRSF8Q9BRL6 282 aaKnown RBP8.27□□□□□ -1.09
HDAC3-210ENST00000490808 SIRPDQ9H106 197 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.09
HDAC3-210ENST00000490808 SVEP1Q4LDE5 3571 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 ATRQ13535 2644 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 SMCO3A2RU48 225 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 PMS2P5A8MQ11 134 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 CORTO00230 105 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
HDAC3-210ENST00000490808 CYB5BO43169 146 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 SLC25A17O43808 307 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 MOSP00540 346 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 IFNA1P01562 189 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 ARL16Q0P5N6 197 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 TMEM41BQ5BJD5 291 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 TOR2AQ5JU69 321 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 CCDC28AQ8IWP9 274 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 CIARTQ8N365 385 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-210ENST00000490808 NARS2Q96I59 477 aaKnown RBP8.26□□□□□ -1.09
HDAC3-210ENST00000490808 SH3BGRL3Q9H299 93 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 TREM1Q9NP99 234 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 SLC39A9Q9NUM3 307 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 C1RLQ9NZP8 487 aa8.26□□□□□ -1.09
HDAC3-210ENST00000490808 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 HAX1O00165 279 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 CA2P00918 260 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 TGFAP01135 160 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 IGLV2-23P01705 113 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 FAM106CPP0CH98 169 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 ZFP36P26651 326 aaKnown RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 GPX4P36969 197 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 TAGLN2P37802 199 aaKnown RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 RPL27AP46776 148 aaKnown RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 DIAPH2-AS1Q14236 149 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 HABP2Q14520 560 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 PSG5Q15238 335 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 TEPPQ6URK8 271 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 HAPLN4Q86UW8 402 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 OR1L6Q8NGR2 347 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 RNASEH2CQ8TDP1 164 aaKnown RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 C22orf15Q8WYQ4 148 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 EIF5A2Q9GZV4 153 aaKnown RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 ZNF430Q9H8G1 570 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 METTL1Q9UBP6 276 aaKnown RBP8.25□□□□□ -1.09
HDAC3-210ENST00000490808 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 WDR83OSQ9Y284 106 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 SIGLEC9Q9Y336 463 aa8.25□□□□□ -1.09
HDAC3-210ENST00000490808 TET2Q6N021 2002 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-210ENST00000490808 IGHV3-72A0A0B4J1Y9 119 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 TRAV1-1A0A0B4J248 108 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 A0A1B0GW64 132 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 RRHO14718 337 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 TIMM23O14925 209 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 NBR2O15453 112 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 VENTXO95231 258 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 LY6G6DO95868 133 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 OPRK1P41145 380 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 PPT1P50897 306 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 RUNX1Q01196 453 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 PAX2Q02962 417 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 AKR1C1Q04828 323 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 HES1Q14469 280 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 TNXAQ16473 311 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 PRSS8Q16651 343 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 RBMS3Q6XE24 437 aaKnown RBP8.24□□□□□ -1.09
HDAC3-210ENST00000490808 NPBQ8NG41 125 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 SFT2D1Q8WV19 159 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 SLC35E1Q96K37 410 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 RSG1Q9BU20 258 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 NPCDR1Q9BY65 106 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 HILPDAQ9Y5L2 63 aa8.24□□□□□ -1.09
HDAC3-210ENST00000490808 A0A1W2PPV4 95 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms