RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GGNQ86UU5 652 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TMEM70Q9BUB7 260 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 SCRT1Q9BWW7 348 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 MKI67P46013 3256 aaKnown RBP10.72□□□□□ -0.69
SHOX2-205ENST00000490689 A8MWL6 223 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 MGST3O14880 152 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 KLF3P57682 345 aaPredicted RBP10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TDHQ8IZJ6 230 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 NPIPB3Q92617 1050 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TNCP24821 2201 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 C3orf79P0CE67 100 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 CSN1S1P47710 185 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TNXAQ16473 311 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 C17orf82Q86X59 251 aaPredicted RBP10.72□□□□□ -0.69
SHOX2-205ENST00000490689 GGTLC1Q9BX51 225 aa10.72□□□□□ -0.69
SHOX2-205ENST00000490689 TRAV3A0A0B4J244 114 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 FBLN7Q53RD9 439 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 C12orf54Q6X4T0 127 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 DNASE2BQ8WZ79 361 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 MCRIP2Q9BUT9 160 aaKnown RBP10.71□□□□□ -0.69
SHOX2-205ENST00000490689 CALYQ9NYX4 217 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 FBXL7Q9UJT9 491 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 YTHDF2Q9Y5A9 579 aaKnown RBP10.71□□□□□ -0.69
SHOX2-205ENST00000490689 F2Z2F3 143 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 C1orf174Q8IYL3 243 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 ADTRPQ96IZ2 230 aa10.71□□□□□ -0.69
SHOX2-205ENST00000490689 VMA21Q3ZAQ7 101 aa10.71□□□□□ -0.7
SHOX2-205ENST00000490689 LINC00473A8K010 186 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 KLF7O75840 302 aaPredicted RBP10.7□□□□□ -0.7
SHOX2-205ENST00000490689 OR2J3O76001 311 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 PRSS1P07477 247 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 SLC35E4Q6ICL7 350 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 TCF24Q7RTU0 167 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 ASCL3Q9NQ33 180 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 THADAQ6YHU6 1953 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 HIGD1CA8MV81 97 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 STAG3L2P0CL84 134 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 STAG3L3P0CL85 134 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 MYOD1P15172 320 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 CCL8P80075 99 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 YLPM1P49750 1951 aaKnown RBP10.7□□□□□ -0.7
SHOX2-205ENST00000490689 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
SHOX2-205ENST00000490689 GPX1P07203 203 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 LINC00614P0C842 121 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 FOXF2Q12947 444 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 ATP1A1-AS1Q5TC04 95 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
SHOX2-205ENST00000490689 SSC4DQ8WTU2 575 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
SHOX2-205ENST00000490689 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
SHOX2-205ENST00000490689 MOSP00540 346 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 PYYP10082 97 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 TM4SF20Q53R12 229 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 FAM222BQ8WU58 562 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
SHOX2-205ENST00000490689 KIAA1549LQ6ZVL6 1849 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 MUC21A0A0G2JKD1 596 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 MUC21A0A140T8X8 626 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 ACP7Q6ZNF0 438 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 OR9G1Q8NH87 305 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 M0QZ24 198 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 CORTO00230 105 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 GNG5P63218 68 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 INO80CQ6PI98 192 aaPredicted RBP10.69□□□□□ -0.7
SHOX2-205ENST00000490689 ITLN1Q8WWA0 313 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 MGST2Q99735 147 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 NUP210Q8TEM1 1887 aaPredicted RBP10.69□□□□□ -0.7
SHOX2-205ENST00000490689 NIT1Q86X76 327 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
SHOX2-205ENST00000490689 C15orf62A8K5M9 175 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 DOPEY2Q9Y3R5 2298 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 A0A1W2PN81 502 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 PPIAL4DF5H284 164 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 COX7A1P24310 79 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 CA7P43166 264 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 LINC00470Q9BZP3 86 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 ZNF703Q9H7S9 590 aaPredicted RBP10.68□□□□□ -0.7
SHOX2-205ENST00000490689 TTC28Q96AY4 2481 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 ARFGEF3Q5TH69 2177 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 TRAV9-2A0A087WT02 112 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 TBR1Q16650 682 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 PERPQ96FX8 193 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 CDC42EP3Q9UKI2 254 aa10.68□□□□□ -0.7
SHOX2-205ENST00000490689 IGLV3-1P01715 115 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 DEFB109BQ30KR1 87 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 MPV17L2Q567V2 206 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 C5orf17Q8NAS9 161 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 EML5Q05BV3 1969 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 A6NDN8 102 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 J3QR89 54 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 HLA-DRB1P01911 266 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 STPG4Q8N801 248 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 OR4F17Q8NGA8 305 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 SRSF12Q8WXF0 261 aaKnown RBP10.67□□□□□ -0.7
SHOX2-205ENST00000490689 C20orf144Q9BQM9 153 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms