RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 DNASE2O00115 360 aaPredicted RBP10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 TIMM23O14925 209 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 YIF1AO95070 293 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 TAGLN2P37802 199 aaKnown RBP10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 HNF4GQ14541 408 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 HAGHQ16775 308 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 CCDC144NLQ6NUI1 221 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 RBMS3Q6XE24 437 aaKnown RBP10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 ZNF114Q8NC26 417 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 NPBQ8NG41 125 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 RAB24Q969Q5 203 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 P2RX4Q99571 388 aa10.91□□□□□ -0.66
RIPPLY3-203ENST00000490393 BCL2P10415 239 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 HOXB4P17483 251 aaPredicted RBP10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 CNTFRP26992 372 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 COMPP49747 757 aaPredicted RBP10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 LCN2P80188 198 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 KLRD1Q13241 179 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 GAMTQ14353 236 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 CLRN3Q8NCR9 226 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 SRSF8Q9BRL6 282 aaKnown RBP10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 GNG13Q9P2W3 67 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 METTL1Q9UBP6 276 aaKnown RBP10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 PXMP4Q9Y6I8 212 aa10.9□□□□□ -0.66
RIPPLY3-203ENST00000490393 IGLC7A0M8Q6 106 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 VWC2LB2RUY7 222 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 ACTL6BO94805 426 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 IFNA1P01562 189 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PAX1P15863 534 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 RPL27AP46776 148 aaKnown RBP10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 UBE2E1P51965 193 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PRR20EP86478 221 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PRR20CP86479 221 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PRR20DP86480 221 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PRR20BP86481 221 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PRR20AP86496 221 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 SOHLH1Q5JUK2 328 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 C10orf55Q5SWW7 151 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 LHFPL4Q7Z7J7 247 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 VAX2Q9UIW0 290 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 SLC45A2Q9UMX9 530 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 TBL2Q9Y4P3 447 aaKnown RBP10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 NDUFA3O95167 84 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 MOSP00540 346 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 OR13C7P0DN81 318 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 NPBWR1P48145 328 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 CDC34P49427 236 aaPredicted RBP10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 EBI3Q14213 229 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 C10orf105Q8TEF2 133 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 HILPDAQ9Y5L2 63 aa10.89□□□□□ -0.67
RIPPLY3-203ENST00000490393 TOX4O94842 621 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 SNRNP70P08621 437 aaKnown RBP10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 LINC00869P0C866 280 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 B2MP61769 119 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 TNXAQ16473 311 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 MIC13Q5XKP0 118 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 SLC35E3Q7Z769 313 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 FAM168AQ92567 244 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 MALSU1Q96EH3 234 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 TBX15Q96SF7 602 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 SLC25A22Q9H936 323 aa10.88□□□□□ -0.67
RIPPLY3-203ENST00000490393 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 PSMB3P49720 205 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 LGALS4P56470 323 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 MLANAQ16655 118 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 STPG3Q8N7X2 389 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 OR2T10Q8NGZ9 312 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 EAF1Q96JC9 268 aaPredicted RBP10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 FBXL15Q9H469 300 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 MANBALQ9NQG1 85 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 IGKV1OR2-108A0A075B7D4 117 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 ZFP92A6NM28 416 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 TEX22C9J3V5 150 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 NBR2O15453 112 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 TSPAN9O75954 239 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 CRYGCP07315 174 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 SSBP2P81877 361 aaPredicted RBP10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 SLC16A13Q7RTY0 426 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 SLC35E1Q96K37 410 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 C19orf24Q9BVV8 132 aa10.87□□□□□ -0.67
RIPPLY3-203ENST00000490393 FAM74A7A6NL05 159 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 FCN1O00602 326 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 STAG3L2P0CL84 134 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 STAG3L3P0CL85 134 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 PAX8Q06710 450 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 SSX2Q16385 188 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 FAM74A3Q4VXF1 159 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 ETFRF1Q6IPR1 90 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 Q8N6K4 173 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 SSMEM1Q8WWF3 244 aa10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
RIPPLY3-203ENST00000490393 LPAR2Q9HBW0 351 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms