RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CTSGP08311 255 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 OR10A3P58181 314 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 WT1-ASQ06250 92 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 CDNFQ49AH0 187 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 SPAG16Q8N0X2 631 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 CADM3Q8N126 398 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 ARL6IP6Q8N6S5 226 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 TMEM116Q8NCL8 245 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 ZBTB34Q8NCN2 500 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 OR10W1Q8NGF6 305 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 SCARB1Q8WTV0 552 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 GPHA2Q96T91 129 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 C20orf24Q9BUV8 137 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 RNF126Q9BV68 326 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 RHPN1-AS1Q9BWJ2 59 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 PLEKHA2Q9HB19 425 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 SCN3BQ9NY72 215 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 ANXA10Q9UJ72 324 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 F11RQ9Y624 299 aaKnown RBP5.95□□□□□ -1.46
USP39-216ENST00000490193 HSPG2P98160 4391 aa5.95□□□□□ -1.46
USP39-216ENST00000490193 IGHV3OR16-8A0A075B7F1 116 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 TRAV2A0A0B4J234 112 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 ZNF207O43670 478 aaKnown RBP5.94□□□□□ -1.46
USP39-216ENST00000490193 DFFBO76075 338 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 AMBPP02760 352 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 HSMCR30P0CW71 290 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 TRAPPC2P0DI81 140 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 TRAPPC2BP0DI82 140 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
USP39-216ENST00000490193 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 OR13C7P0DN81 318 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 MIFP14174 115 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 HLA-DMBP28068 263 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 RELQ04864 619 aaPredicted RBP5.94□□□□□ -1.46
USP39-216ENST00000490193 CATR1Q13166 79 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
USP39-216ENST00000490193 TMEM41BQ5BJD5 291 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 OGFRL1Q5TC84 451 aaPredicted RBP5.94□□□□□ -1.46
USP39-216ENST00000490193 PVRIGQ6DKI7 326 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 SLC25A24Q6NUK1 477 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 ZNF773Q6PK81 442 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 Q6ZTC4 211 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 OR1L8Q8NGR8 309 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 NUDCD2Q8WVJ2 157 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 DGCR14Q96DF8 476 aaKnown RBP5.94□□□□□ -1.46
USP39-216ENST00000490193 MGLLQ99685 303 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 ATG5Q9H1Y0 275 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 DUSP21Q9H596 190 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 CCL28Q9NRJ3 127 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 NDUFA4L2Q9NRX3 87 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 COMMD9Q9P000 198 aa5.94□□□□□ -1.46
USP39-216ENST00000490193 HERC1Q15751 4861 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 IGHV4-28A0A0C4DH34 117 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 TEX50A0A1B0GTY4 177 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 TMEM235A6NFC5 223 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 ZNF705EA8MWA4 302 aaPredicted RBP5.93□□□□□ -1.46
USP39-216ENST00000490193 CASQ2O14958 399 aaPredicted RBP5.93□□□□□ -1.46
USP39-216ENST00000490193 TNFSF12O43508 249 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 SSX5O60225 188 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 SCGNO76038 276 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 PPYP01298 95 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 GIG44P09565 113 aaPredicted RBP5.93□□□□□ -1.46
USP39-216ENST00000490193 P0DMU3 169 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 FAM231AP0DMU4 169 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 FAM231CP0DMU5 169 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 RAB3BP20337 219 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 TFPI2P48307 235 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 PAFAH1B2P68402 229 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 LGALS9BQ3B8N2 356 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 POM121L12Q8N7R1 296 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 OR13F1Q8NGS4 319 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 SECTM1Q8WVN6 248 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 LSM10Q969L4 123 aaKnown RBP5.93□□□□□ -1.46
USP39-216ENST00000490193 CMTM3Q96MX0 182 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 VSIRQ9H7M9 311 aa5.93□□□□□ -1.46
USP39-216ENST00000490193 TRAV14DV4A0A0A6YYC5 116 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 IGHV3-21A0A0B4J1V1 117 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 MARCH11A6NNE9 402 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 SULT1C2O00338 296 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 NUPL2O15504 423 aaKnown RBP5.92□□□□□ -1.46
USP39-216ENST00000490193 RGS10O43665 173 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 HNRNPCP07910 306 aaKnown RBP eCLIP5.92□□□□□ -1.46
USP39-216ENST00000490193 MYL9P24844 172 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 FCGR2CP31995 323 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 GNG2P59768 71 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 RCN1Q15293 331 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 Q56UQ5 140 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 TCF24Q7RTU0 167 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 TRPT1Q86TN4 253 aaKnown RBP5.92□□□□□ -1.46
USP39-216ENST00000490193 GBGT1Q8N5D6 347 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 UBAC2Q8NBM4 344 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 DMBX1Q8NFW5 382 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 OR1P1Q8NH06 330 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 TXN2Q99757 166 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 CCDC90BQ9GZT6 254 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 NXF2Q9GZY0 626 aaKnown RBP5.92□□□□□ -1.46
USP39-216ENST00000490193 MS4A6AQ9H2W1 248 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 TPRKBQ9Y3C4 175 aa5.92□□□□□ -1.46
USP39-216ENST00000490193 X6R8D5 127 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms