RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 TRBV9A0A0B4J1U6 114 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 OR2J3O76001 311 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 IFNA21P01568 189 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 IGHV3-11P01762 117 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 LGALS1P09382 135 aaKnown RBP8.44□□□□□ -1.06
VPS13D-210ENST00000489961 SLC25A6P12236 298 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 MYCNOSP40205 109 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 HOXA1P49639 335 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-210ENST00000489961 RUNX1Q01196 453 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 ATP5G2Q06055 141 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 AARDQ4LEZ3 155 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 SPINK9Q5DT21 86 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 GGNBP1Q5YKI7 109 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 C19orf35Q6ZS72 473 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 OR52B4Q8NGK2 314 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 ZNF431Q8TF32 576 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-210ENST00000489961 MITD1Q8WV92 249 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 FANCD2OSQ96PS1 177 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 OR5B12Q96R08 314 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 SEC22CQ9BRL7 303 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 FBXL7Q9UJT9 491 aa8.44□□□□□ -1.06
VPS13D-210ENST00000489961 F11RQ9Y624 299 aaKnown RBP8.44□□□□□ -1.06
VPS13D-210ENST00000489961 IGLV11-55A0A075B6I3 123 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 CEBPZOSA8MTT3 80 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 INS-IGF2F8WCM5 200 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 I3L521 148 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 CCL24O00175 119 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 PRAF2O60831 178 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 IL5P05113 134 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 SNCAP37840 140 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 DEFA5Q01523 94 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 KLK9Q2XQG4 91 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 DEFB136Q30KP8 78 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 C15orf32Q32M92 178 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 PDLIM3Q53GG5 364 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-210ENST00000489961 SLC25A24Q6NUK1 477 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 TREML4Q6UXN2 200 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 OR2C3Q8N628 320 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 OR1N2Q8NGR9 330 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 DPF1Q92782 380 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 GPN1Q9HCN4 374 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-210ENST00000489961 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
VPS13D-210ENST00000489961 ADAP1O75689 374 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 NXPH3O95157 252 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 NDUFB8O95169 186 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 PTTG1O95997 202 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 HSPB1P04792 205 aaKnown RBP8.42□□□□□ -1.06
VPS13D-210ENST00000489961 SUB1P53999 127 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS13D-210ENST00000489961 TNFRSF9Q07011 255 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 ZNF616Q08AN1 781 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 EXOSC2Q13868 293 aaKnown RBP8.42□□□□□ -1.06
VPS13D-210ENST00000489961 FAM209BQ5JX69 171 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 ZNF343Q6P1L6 599 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 ETV3LQ6ZN32 361 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 C12orf45Q8N5I9 185 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-210ENST00000489961 UXS1Q8NBZ7 420 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 ZNF114Q8NC26 417 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 OR11H1Q8NG94 326 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 OR1P1Q8NH06 330 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 CXorf58Q96LI9 332 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 DUX3Q96PT4 197 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 P2RX4Q99571 388 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 MARVELD1Q9BSK0 173 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 HIPK2Q9H2X6 1198 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 HEYLQ9NQ87 328 aaPredicted RBP8.42□□□□□ -1.06
VPS13D-210ENST00000489961 HSPB7Q9UBY9 170 aa8.42□□□□□ -1.06
VPS13D-210ENST00000489961 ANK2Q01484 3957 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 ANKRD34BA5PLL1 514 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 FAM90A26D6RGX4 464 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 LINC01619G3V211 115 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 PITX3O75364 302 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 MED6O75586 246 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 OR8U8P0C7N1 319 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 CD33P20138 364 aa8.41□□□□□ -1.06
VPS13D-210ENST00000489961 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
VPS13D-210ENST00000489961 RANGRFQ9HD47 186 aaPredicted RBP8.41□□□□□ -1.06
VPS13D-210ENST00000489961 PEF1Q9UBV8 284 aaKnown RBP8.41□□□□□ -1.06
VPS13D-210ENST00000489961 IGHV4OR15-8A0A075B7B6 117 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 A0A087WW49 117 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 TRBV7-1A0A0A6YYK4 115 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 SNRPGP15A8MWD9 76 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 CORTO00230 105 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 ZP3P21754 424 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 HTR2BP41595 481 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 MFAP2P55001 183 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 FHL3Q13643 280 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 NOXA1Q86UR1 476 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 LINC00482Q8N8I6 264 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 VN1R17PQ8TDU5 208 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 DTD1Q8TEA8 209 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 MISP3Q96FF7 219 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 RBKSQ9H477 322 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 DMRT1Q9Y5R6 373 aa8.4□□□□□ -1.06
VPS13D-210ENST00000489961 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.39□□□□□ -1.07
VPS13D-210ENST00000489961 MFSD2BA6NFX1 497 aa8.39□□□□□ -1.07
VPS13D-210ENST00000489961 MPTX1A8MV57 137 aa8.39□□□□□ -1.07
VPS13D-210ENST00000489961 RNASE2P10153 161 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms