RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 CA7P43166 264 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 GALR1P47211 349 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ATP5G3P48201 142 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ZNF137PP52743 207 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 DLX6P56179 175 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 GNB1P62873 340 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 RPL8P62917 257 aaKnown RBP7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ERHP84090 104 aaKnown RBP7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 VMA21Q3ZAQ7 101 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 FBXL19-AS1Q494R0 122 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TMEM144Q7Z5S9 345 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TGIF2LXQ8IUE1 241 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 OR5AN1Q8NGI8 311 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 OR9G1Q8NH87 305 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 FLYWCH2Q96CP2 140 aaKnown RBP7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 BTF3L4Q96K17 158 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SSX3Q99909 188 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TMEM204Q9BSN7 226 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CHODLQ9H9P2 273 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 DOK5Q9P104 306 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SLC45A2Q9UMX9 530 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 PRRC2CQ9Y520 2896 aaKnown RBP7.77□□□□□ -1.17
RAB3GAP1-205ENST00000489858 DIDO1Q9BTC0 2240 aaKnown RBP7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 AKAP13Q12802 2813 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CACNA1DQ01668 2161 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 FAM90A27PA6NNH2 459 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 FCN3O75636 299 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CD99P14209 185 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HOXA5P20719 270 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CHRNB4P30926 498 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 MC5RP33032 325 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 GPX4P36969 197 aaPredicted RBP7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 NDUFA6P56556 154 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 KCNIP4Q6PIL6 250 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SLC16A13Q7RTY0 426 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 MRPL41Q8IXM3 137 aaKnown RBP7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 OR4C13Q8NGP0 309 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 C1orf159Q96HA4 380 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 UHRF2Q96PU4 802 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 C19orf24Q9BVV8 132 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SRD5A3Q9H8P0 318 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TMEM167BQ9NRX6 74 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CADP27708 2225 aa7.76□□□□□ -1.17
RAB3GAP1-205ENST00000489858 MDFIC2A0A1B0GVS7 189 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SRRM4A7MD48 611 aaKnown RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TRGC2P03986 189 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 LINC00869P0C866 280 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 IGHV1-8P0DP01 117 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 NPPCP23582 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 S100A2P29034 98 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CDX1P47902 265 aaPredicted RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 REG1BP48304 166 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SUB1P53999 127 aaKnown RBP eCLIP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 CD69Q07108 199 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 KLRB1Q12918 225 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 PNKDQ8N490 385 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ST6GALNAC3Q8NDV1 305 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ABHD5Q8WTS1 349 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TNFRSF14Q92956 283 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ST6GALNAC6Q969X2 333 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 C11orf52Q96A22 123 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 RNF2Q99496 336 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 MRPL32Q9BYC8 188 aaKnown RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TMEM133Q9H2Q1 129 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 NDUFA4L2Q9NRX3 87 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TECRQ9NZ01 308 aaKnown RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 FUT9Q9Y231 359 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 MUC6Q6W4X9 2439 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ZFHX2Q9C0A1 2572 aaPredicted RBP7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 DOCK11Q5JSL3 2073 aa7.75□□□□□ -1.17
RAB3GAP1-205ENST00000489858 GVINP1Q7Z2Y8 2422 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 ANKRD11Q6UB99 2663 aaPredicted RBP7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 PPP5D1E7EU14 171 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 GGCTO75223 188 aaKnown RBP7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 NDUFB4O95168 129 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 FSTL3O95633 263 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 RBP4P02753 201 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TRGC1P0CF51 173 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 AREGP15514 252 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 OR10J1P30954 320 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 PPOXP50336 477 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 TAS2R45P59539 299 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 HLA-DRB5Q30154 266 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 SPATA31B1PQ5VZV4 182 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
RAB3GAP1-205ENST00000489858 NECAP1Q8NC96 275 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms