RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MPDU1O75352 247 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1D-12P01611 117 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IL11P20809 199 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 FBLP22087 321 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CDAP32320 146 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 OPRK1P41145 380 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 PARM1Q6UWI2 310 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 DHRS13Q6UX07 377 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 DOLPP1Q86YN1 238 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 TTC9CQ8N5M4 171 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 GCSAMQ8N6F7 178 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 TEX45Q8NA69 505 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 GJC3Q8NFK1 279 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 OR9G4Q8NGQ1 327 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 OR51H1Q8NH63 302 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CACNG8Q8WXS5 425 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 GALMQ96C23 342 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 BORCS8Q96FH0 119 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 DEFB118Q96PH6 123 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 TRIB1Q96RU8 372 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 SPAG8Q99932 426 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CLCF1Q9UBD9 225 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 SS18L2Q9UHA2 77 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 ERRFI1Q9UJM3 462 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CYSLTR1Q9Y271 337 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 WDR83OSQ9Y284 106 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 YTHDF2Q9Y5A9 579 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 SPAG17Q6Q759 2223 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 CHD7Q9P2D1 2997 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 hADV38S2A0JD32 116 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 F5H5K5 113 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 TNFSF11O14788 317 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 ARL14EPLP0DKL9 152 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 IL12BP29460 328 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 GCHFRP30047 84 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 RPL8P62917 257 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 SLC35B1P78383 322 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 SRSF6Q13247 344 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 MFAP5Q13361 173 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 RSPO1Q2MKA7 263 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF585BQ52M93 769 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 LINC01545Q5VT33 79 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 SPATA31B1PQ5VZV4 182 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 PCSK4Q6UW60 755 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 FGFRL1Q8N441 504 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 Q8N7P7 452 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 STPG3Q8N7X2 389 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 OR10D3Q8NH80 312 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 ST8SIA1Q92185 356 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 C19orf24Q9BVV8 132 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 GGTLC1Q9BX51 225 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 ALKBH4Q9NXW9 302 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 TBC1D29Q9UFV1 150 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 RABAC1Q9UI14 185 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 TNFRSF18Q9Y5U5 241 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 WNT6Q9Y6F9 365 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 CACNA1IQ9P0X4 2223 aa3.94□□□□□ -1.78
SNRNP40-206ENST00000489853 TRBV6-6A0A0A6YYG2 114 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1-6A0A0C4DH72 117 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 A1L4Q6 167 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 VWC2LB2RUY7 222 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 IGHV3-7P01780 117 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 MGST1P10620 155 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 FGF6P10767 208 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 DRD3P35462 400 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 TCL1AP56279 114 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 EDDM3BP56851 147 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 FBXW4P57775 412 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CEACAM16Q2WEN9 425 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 CENPWQ5EE01 88 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 GCSAMLQ5JQS6 135 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 IBA57Q5T440 356 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 TMEM42Q69YG0 159 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 PQLC2Q6ZP29 291 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 FOXL2NBQ6ZUU3 175 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 DTX1Q86Y01 620 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 BOD1L2Q8IYS8 172 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 NHLRC2Q8NBF2 726 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 OR52E5Q8NH55 327 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 OR10G6Q8NH81 332 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 LRRC29Q8WV35 223 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 RNF183Q96D59 192 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 RNASE7Q9H1E1 156 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 LIN7CQ9NUP9 197 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 HIF1ANQ9NWT6 349 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 R4GN57 208 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 TNRC6AQ8NDV7 1962 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 PRRC2BQ5JSZ5 2229 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 TMEM131Q92545 1883 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 IGHV1-24A0A0C4DH33 117 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF716A6NP11 495 aa3.93□□□□□ -1.78
SNRNP40-206ENST00000489853 NPIPB11E5RHQ5 1161 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms