RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 YIF1AO95070 293 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 CTSGP08311 255 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-217ENST00000489581 ERVK-16P61578 105 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
TOP3B-217ENST00000489581 ZNF414Q96IQ9 312 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 COMMD9Q9P000 198 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 MUC4Q99102 2169 aa12.42□□□□□ -0.42
TOP3B-217ENST00000489581 IGHV3OR16-13A0A075B7E8 117 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 IGHV3-74A0A0B4J1X5 117 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 IGLL5B9A064 214 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 CA1P00915 261 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-217ENST00000489581 SFXN4Q6P4A7 337 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 OR5H6Q8NGV6 325 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 GIMAP1Q8WWP7 306 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 CNBD2Q96M20 576 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 OR51B2Q9Y5P1 312 aa12.41□□□□□ -0.42
TOP3B-217ENST00000489581 PCLOQ9Y6V0 5065 aa12.4□□□□□ -0.42
TOP3B-217ENST00000489581 MRPS14O60783 128 aaKnown RBP12.4□□□□□ -0.42
TOP3B-217ENST00000489581 GNRHRP30968 328 aa12.4□□□□□ -0.42
TOP3B-217ENST00000489581 FGF9P31371 208 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-217ENST00000489581 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
TOP3B-217ENST00000489581 BLOC1S6Q9UL45 172 aa12.4□□□□□ -0.42
TOP3B-217ENST00000489581 APLNQ9ULZ1 77 aa12.4□□□□□ -0.42
TOP3B-217ENST00000489581 NUPL2O15504 423 aaKnown RBP12.39□□□□□ -0.43
TOP3B-217ENST00000489581 KRASP01116 189 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 RLN1P04808 185 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 G6PCP35575 357 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 LPAR6P43657 344 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 TCTAP57738 103 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 RELQ04864 619 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-217ENST00000489581 TMEM187Q14656 261 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 FAM90A2PQ658T7 463 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 SLC25A38Q96DW6 304 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 CMTM3Q96MX0 182 aa12.39□□□□□ -0.43
TOP3B-217ENST00000489581 TRAV14DV4A0A0A6YYC5 116 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 MEIS3P1A6NDR6 274 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 SNAPC5O75971 98 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 CLEC2LP0C7M8 214 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 F2RP25116 425 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 SDC2P34741 201 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 HERV-K104P61576 105 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 MXD1Q05195 221 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 TCF24Q7RTU0 167 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 OR5AP2Q8NGF4 316 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 FCAMRQ8WWV6 532 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 SLC25A46Q96AG3 418 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 MISP3Q96FF7 219 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 OR10C1Q96KK4 312 aa12.38□□□□□ -0.43
TOP3B-217ENST00000489581 DBX1A6NMT0 343 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 XRCC3O43542 346 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 PGLYRP1O75594 196 aaPredicted RBP12.37□□□□□ -0.43
TOP3B-217ENST00000489581 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 PSMB9P28065 219 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 LEMD1Q68G75 181 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 OR1P1Q8NH06 330 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 DGCR14Q96DF8 476 aaKnown RBP12.37□□□□□ -0.43
TOP3B-217ENST00000489581 TMEM56Q96MV1 263 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 AUNIPQ9H7T9 357 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 SSR3Q9UNL2 185 aa12.37□□□□□ -0.43
TOP3B-217ENST00000489581 MFAP4P55083 255 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 DEFB131AP59861 70 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 IDNKQ5T6J7 187 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 UBE2UQ5VVX9 321 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 TSPAN14Q8NG11 270 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 BORCS5Q969J3 196 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
TOP3B-217ENST00000489581 EHFQ9NZC4 300 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
TOP3B-217ENST00000489581 C15orf61A6NNL5 157 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 I3L2K1 104 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-217ENST00000489581 CBX5P45973 191 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 RFX2P48378 723 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 LILRB2Q8N423 598 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 Q8NAQ8 132 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 ST8SIA2Q92186 375 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 ZNF2Q9BSG1 426 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-217ENST00000489581 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 RNF167Q9H6Y7 350 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 DIABLOQ9NR28 239 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 FKBP11Q9NYL4 201 aa12.35□□□□□ -0.43
TOP3B-217ENST00000489581 A0A0A6YYH2 397 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 IGHV3-66A0A0C4DH42 116 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 A6NJ64 397 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 ST8SIA3O43173 380 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 MT-CO2P00403 227 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-217ENST00000489581 EIF4EP06730 217 aaKnown RBP12.34□□□□□ -0.43
TOP3B-217ENST00000489581 DHRS11Q6UWP2 260 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 IZUMO2Q6UXV1 221 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 CADM3Q8N126 398 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 TXN2Q99757 166 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 IFT46Q9NQC8 304 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 TMEM14BQ9NUH8 114 aa12.34□□□□□ -0.43
TOP3B-217ENST00000489581 GNG7O60262 68 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms