RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 A0A1W2PN81 502 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 MEX3AA1L020 520 aaKnown RBP6.88□□□□□ -1.31
VTI1A-207ENST00000489357 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 J3QR06 171 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 PDE6DO43924 150 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 VENTXO95231 258 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 IFNA4P05014 189 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 SNRNP70P08621 437 aaKnown RBP6.88□□□□□ -1.31
VTI1A-207ENST00000489357 CHRNA7P36544 502 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 RPL29P47914 159 aaKnown RBP6.88□□□□□ -1.31
VTI1A-207ENST00000489357 LGALS7P47929 136 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 CDC34P49427 236 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-207ENST00000489357 DLX6P56179 175 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 ZNF672Q499Z4 452 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-207ENST00000489357 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 ACSM6Q6P461 480 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 TEPPQ6URK8 271 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 LCN15Q6UWW0 184 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 CYP2G1PQ6ZSU1 146 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 PNKDQ8N490 385 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 C8orf46Q8TAG6 207 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM167AQ8TBQ9 72 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 RXFP4Q8TDU9 374 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 RAB24Q969Q5 203 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 ST6GALNAC6Q969X2 333 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 CHODLQ9H9P2 273 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 WASHC3Q9Y3C0 194 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 OR51B2Q9Y5P1 312 aa6.88□□□□□ -1.31
VTI1A-207ENST00000489357 PUS1Q9Y606 427 aaKnown RBP eCLIP6.88□□□□□ -1.31
VTI1A-207ENST00000489357 A0A1W2PPV4 95 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 ZFP92A6NM28 416 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 F6UZH7 168 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 H0YJW9 148 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 DVL1O14640 695 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 OR2C1O95371 312 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 MT-CO2P00403 227 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 IGKV1D-33P01593 117 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 IGKV1-33P01594 117 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 RAB5AP20339 215 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 GPX4P36969 197 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-207ENST00000489357 GNG10P50151 68 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 PRRX1P54821 245 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 ELLP55199 621 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-207ENST00000489357 DUX4L9Q6RFH8 374 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-207ENST00000489357 SSX9Q7RTT3 188 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 LURAP1LQ8IV03 231 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 MUC15Q8N387 334 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 Q8N7P7 452 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 BEND2Q8NDZ0 799 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 OR10X1Q8NGY0 326 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 NEUROG1Q92886 237 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 HIST1H2BAQ96A08 127 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 FLYWCH2Q96CP2 140 aaKnown RBP6.87□□□□□ -1.31
VTI1A-207ENST00000489357 BTF3L4Q96K17 158 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 SLC35E1Q96K37 410 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 RNF5Q99942 180 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 RAB1BQ9H0U4 201 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 VSIRQ9H7M9 311 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 AMMECR1Q9Y4X0 333 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-207ENST00000489357 RFNGQ9Y644 331 aa6.87□□□□□ -1.31
VTI1A-207ENST00000489357 A0A1B0GV50 99 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 CLDN34H7C241 214 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 RRHO14718 337 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 MMP23AO75900 390 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 CXorf1O96002 111 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 CRYBA1P05813 215 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 IGHV1-8P0DP01 117 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 COMPP49747 757 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 RND2P52198 227 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 SUB1P53999 127 aaKnown RBP eCLIP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 LINC00205P59089 165 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 RHOBP62745 196 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 RPL8P62917 257 aaKnown RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 ERHP84090 104 aaKnown RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 HNF4GQ14541 408 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 HLA-DRB5Q30154 266 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 WDR25Q64LD2 544 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 TGIF2LYQ8IUE0 185 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 TGIF2LXQ8IUE1 241 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 RNASEH2CQ8TDP1 164 aaKnown RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 NEU4Q8WWR8 484 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 H1FXQ92522 213 aaKnown RBP6.86□□□□□ -1.31
VTI1A-207ENST00000489357 NRGNQ92686 78 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 HARBI1Q96MB7 349 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 RNF2Q99496 336 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 NABP2Q9BQ15 211 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 COMMD5Q9GZQ3 224 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM133Q9H2Q1 129 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 SDF2L1Q9HCN8 221 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 CTSZQ9UBR2 303 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 MIOXQ9UGB7 285 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 CSMD1Q96PZ7 3565 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 CSMD2Q7Z408 3487 aa6.86□□□□□ -1.31
VTI1A-207ENST00000489357 MAP1AP78559 2803 aaPredicted RBP6.85□□□□□ -1.31
VTI1A-207ENST00000489357 ZNF727A8MUV8 499 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms