RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 H3BMM0 161 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 FKBP6O75344 327 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 IGKV3-20P01619 116 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 DCKP27707 260 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 POLR2IP36954 125 aaKnown RBP7.93□□□□□ -1.14
HDAC6-233ENST00000489352 KCTD21Q4G0X4 260 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 THOC7Q6I9Y2 204 aaKnown RBP7.93□□□□□ -1.14
HDAC6-233ENST00000489352 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 TOMM20LQ6UXN7 152 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 AQP12AQ8IXF9 295 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 MOB3AQ96BX8 217 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 URM1Q9BTM9 101 aaKnown RBP7.93□□□□□ -1.14
HDAC6-233ENST00000489352 TMEM208Q9BTX3 173 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 BET1LQ9NYM9 111 aa7.93□□□□□ -1.14
HDAC6-233ENST00000489352 K7EIM0 57 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 SOCS1O15524 211 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 TRAPPC2P0DI81 140 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 TRAPPC2BP0DI82 140 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 RBM48Q5RL73 367 aaKnown RBP7.92□□□□□ -1.14
HDAC6-233ENST00000489352 SPATA24Q86W54 205 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 DCANP1Q8TF63 244 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 SLC25A46Q96AG3 418 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 GNPNAT1Q96EK6 184 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-233ENST00000489352 HSD17B10Q99714 261 aaKnown RBP7.92□□□□□ -1.14
HDAC6-233ENST00000489352 TXN2Q99757 166 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 SLC29A1Q99808 456 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 CIB1Q99828 191 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 HINT2Q9BX68 163 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 SPATA2Q9UM82 520 aa7.92□□□□□ -1.14
HDAC6-233ENST00000489352 MRPS16Q9Y3D3 137 aaKnown RBP7.92□□□□□ -1.14
HDAC6-233ENST00000489352 F11RQ9Y624 299 aaKnown RBP7.92□□□□□ -1.14
HDAC6-233ENST00000489352 TRBV5-5A0A0J9YX44 114 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 SLC22A5O76082 557 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 DIRAS3O95661 229 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 P2RY1P47900 373 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 RPL30P62888 115 aaKnown RBP7.91□□□□□ -1.14
HDAC6-233ENST00000489352 TIMM50Q3ZCQ8 353 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 YIF1BQ5BJH7 314 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 XAF1Q6GPH4 301 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 TMPRSS11AQ6ZMR5 421 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 ZNF114Q8NC26 417 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 OR4C16Q8NGL9 310 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 SMIM19Q96E16 107 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 CABLES2Q9BTV7 478 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 CENPOQ9BU64 300 aa7.91□□□□□ -1.14
HDAC6-233ENST00000489352 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 CBY3A6NI87 242 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 M0QYG6 137 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 HLA-DRB4P13762 266 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 AP2S1P53680 142 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-233ENST00000489352 WT1-ASQ06250 92 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 OR5I1Q13606 314 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 ESRGQ1W209 222 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 FCGR1BQ92637 280 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 MISP3Q96FF7 219 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 METTL26Q96S19 204 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 RBMX2Q9Y388 322 aaKnown RBP7.9□□□□□ -1.14
HDAC6-233ENST00000489352 HLA-DRB4X5D2U9 266 aa7.9□□□□□ -1.14
HDAC6-233ENST00000489352 UPK2O00526 184 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 SIVA1O15304 175 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 RS1O15537 224 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 BPNT1O95861 308 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 ARHGAP5-AS1Q96IT6 56 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 FAM212BQ9NTI7 297 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-233ENST00000489352 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 TNFRSF18Q9Y5U5 241 aa7.89□□□□□ -1.15
HDAC6-233ENST00000489352 A0A0A6YYD4 124 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 OGG1O15527 345 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 ST3GAL4Q11206 333 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 UNC119Q13432 240 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 ZNF600Q6ZNG1 722 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 H1FOOQ8IZA3 346 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-233ENST00000489352 DMBX1Q8NFW5 382 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 OR4B1Q8NGF8 309 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 OR1L8Q8NGR8 309 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-233ENST00000489352 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
HDAC6-233ENST00000489352 PECRQ9BY49 303 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 GABARAPL3Q9BY60 117 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 KCNK15Q9H427 330 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 TAS2R8Q9NYW2 309 aa7.88□□□□□ -1.15
HDAC6-233ENST00000489352 TRAV26-1A0A087WT03 109 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 TRAV3A0A0B4J244 114 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 TEX50A0A1B0GTY4 177 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 NPIPB6E9PJ23 425 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 IGHV3-48P01763 117 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 C1QBP02746 253 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 CDK1P06493 297 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 CD37P11049 281 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 RXFP4Q8TDU9 374 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 GLMPQ8WWB7 406 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 PINX1Q96BK5 328 aaKnown RBP7.87□□□□□ -1.15
HDAC6-233ENST00000489352 LPAR5Q9H1C0 372 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 AMBNQ9NP70 447 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 BABAM2Q9NXR7 383 aa7.87□□□□□ -1.15
HDAC6-233ENST00000489352 TRAV9-2A0A087WT02 112 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 A0A0J9YY99 117 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 FCGR3AP08637 254 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 NQO2P16083 231 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms