RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TEX22C9J3V5 150 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 E7EUB6 86 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 FGF16O43320 207 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 REG1AP05451 166 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 APELAP0DMC3 54 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 AREGP15514 252 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 CX3CL1P78423 397 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 DLK1P80370 383 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 TUSC1Q2TAM9 212 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 BSXQ3C1V8 233 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 C16orf82Q7Z2V1 217 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 BCL6BQ8N143 479 aaPredicted RBP7.96□□□□□ -1.14
USP11-211ENST00000489111 C5orf56Q8N8D9 126 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 OR5R1Q8NH85 324 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 PIFOQ8TCI5 191 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 TMED6Q8WW62 240 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 GNPNAT1Q96EK6 184 aaPredicted RBP7.96□□□□□ -1.14
USP11-211ENST00000489111 GGACTQ9BVM4 153 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 PARP11Q9NR21 331 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 CCDC168Q8NDH2 2452 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 DOCK11Q5JSL3 2073 aa7.96□□□□□ -1.14
USP11-211ENST00000489111 CSMD2Q7Z408 3487 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 MED13LQ71F56 2210 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 PMS2P5A8MQ11 134 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 CYB5BO43169 146 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 FBXO24O75426 580 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 TSPAN9O75954 239 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 IGHV4-59P01825 116 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 DEFA4P12838 97 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 FGF7P21781 194 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 SSBP2P81877 361 aaPredicted RBP7.95□□□□□ -1.14
USP11-211ENST00000489111 AKR1C1Q04828 323 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 RNASEH2CQ8TDP1 164 aaKnown RBP7.95□□□□□ -1.14
USP11-211ENST00000489111 TMEM170AQ8WVE7 144 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 P2RX4Q99571 388 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 GINS3Q9BRX5 216 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 FAM103A1Q9BTL3 118 aaKnown RBP7.95□□□□□ -1.14
USP11-211ENST00000489111 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
USP11-211ENST00000489111 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 PDZD2O15018 2839 aa7.95□□□□□ -1.14
USP11-211ENST00000489111 MAP1AP78559 2803 aaPredicted RBP7.94□□□□□ -1.14
USP11-211ENST00000489111 IGHV7-81A0A0B4J1V7 117 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 CORTO00230 105 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 OPRK1P41145 380 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 NDPQ00604 133 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 SCGB2A2Q13296 93 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 VWC2Q2TAL6 325 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 C9orf152Q5JTZ5 239 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 FAM74A1Q5RGS3 127 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 IL17RELQ6ZVW7 336 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 SLC16A13Q7RTY0 426 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 ZNF709Q8N972 641 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 OR1L6Q8NGR2 347 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 OR1P1Q8NH06 330 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 TAF15Q92804 592 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP11-211ENST00000489111 MISP3Q96FF7 219 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 SLC35E1Q96K37 410 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 HSPB9Q9BQS6 159 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
USP11-211ENST00000489111 SH3BGRL3Q9H299 93 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 SLC25A32Q9H2D1 315 aa7.94□□□□□ -1.14
USP11-211ENST00000489111 F11RQ9Y624 299 aaKnown RBP7.94□□□□□ -1.14
USP11-211ENST00000489111 ITPR3Q14573 2671 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 NPIPB5A8MRT5 1133 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 PRSS46E5RG02 174 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 FNDC10F2Z333 226 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 SEC11BP0C7V7 166 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 SPP1P10451 314 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 ATP6V0CP27449 155 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 IER3P46695 156 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 RUNX1Q01196 453 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 ECSCRQ19T08 205 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 ETFRF1Q6IPR1 90 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 BTNL8Q6UX41 500 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 RBMS3Q6XE24 437 aaKnown RBP7.93□□□□□ -1.14
USP11-211ENST00000489111 OR2G3Q8NGZ4 309 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 KCNIP2Q9NS61 270 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 TNFRSF19Q9NS68 423 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 VPREB3Q9UKI3 123 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 ITPR2Q14571 2701 aa7.93□□□□□ -1.14
USP11-211ENST00000489111 SH2D7A6NKC9 451 aaPredicted RBP7.92□□□□□ -1.14
USP11-211ENST00000489111 C17orf112F2Z3M2 114 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 ATP6V0E1O15342 81 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 MPDU1O75352 247 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 PRH1P02810 166 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 CTRB1P17538 263 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 GPX4P36969 197 aaPredicted RBP7.92□□□□□ -1.14
USP11-211ENST00000489111 CD69Q07108 199 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 RAB31Q13636 194 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 ARSJQ5FYB0 599 aaPredicted RBP7.92□□□□□ -1.14
USP11-211ENST00000489111 AKR1C8PQ5T2L2 129 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 CTRB2Q6GPI1 263 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 UNQ5815/PRO19632Q6UWF5 114 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 Q6YL49 198 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 TMEM182Q6ZP80 229 aaPredicted RBP7.92□□□□□ -1.14
USP11-211ENST00000489111 C19orf35Q6ZS72 473 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 SLC35E3Q7Z769 313 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms