RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 HTR2BP41595 481 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 KLK9Q2XQG4 91 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 AKIRIN2Q53H80 203 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 CTRB2Q6GPI1 263 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 TTC9CQ8N5M4 171 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 DCUN1D4Q92564 292 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 PARP11Q9NR21 331 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 KLK9Q9UKQ9 250 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 CUBNO60494 3623 aa12.61□□□□□ -0.39
CLDN11-208ENST00000488989 FAM181BA6NEQ2 426 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 FAM24AA6NFZ4 105 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 C15orf62A8K5M9 175 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 AP4M1O00189 453 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 TCF21O43680 179 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 RPP30P78346 268 aaKnown RBP12.6□□□□□ -0.39
CLDN11-208ENST00000488989 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
CLDN11-208ENST00000488989 C9orf152Q5JTZ5 239 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 TMEM252Q8N6L7 170 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 LFNGQ8NES3 379 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 SLC24A4Q8NFF2 622 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 AQP10Q96PS8 301 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 OR4C12Q96R67 309 aa12.6□□□□□ -0.39
CLDN11-208ENST00000488989 STRAPQ9Y3F4 350 aaKnown RBP12.6□□□□□ -0.39
CLDN11-208ENST00000488989 RNF222A6NCQ9 220 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 PMS2P5A8MQ11 134 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 H3BP45 60 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 TSPAN9O75954 239 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 HKR1P10072 659 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 NPY1RP25929 384 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 ACOT7LQ6ZUV0 252 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 FAM110DQ8TAY7 271 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-208ENST00000488989 P2RX4Q99571 388 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 SLC25A31Q9H0C2 315 aa12.59□□□□□ -0.39
CLDN11-208ENST00000488989 F11RQ9Y624 299 aaKnown RBP12.59□□□□□ -0.39
CLDN11-208ENST00000488989 IGSF23A1L1A6 192 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 FBXO24O75426 580 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 IFNA10P01566 189 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 RPL12P30050 165 aaKnown RBP12.58□□□□□ -0.4
CLDN11-208ENST00000488989 SNCAP37840 140 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 CAV2P51636 162 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 SUB1P53999 127 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLDN11-208ENST00000488989 BAXQ07812 192 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 ZNF345Q14585 488 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 UNQ5815/PRO19632Q6UWF5 114 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 STPG2Q8N412 459 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 OR1L6Q8NGR2 347 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 OR1P1Q8NH06 330 aa12.58□□□□□ -0.4
CLDN11-208ENST00000488989 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 BOLA2-SMG1P6H3BVE0 249 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 ARPC5O15511 151 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 SCAF4O95104 1147 aaKnown RBP12.57□□□□□ -0.4
CLDN11-208ENST00000488989 BRI3O95415 125 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 REG1AP05451 166 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 APELAP0DMC3 54 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 PPIFP30405 207 aaKnown RBP12.57□□□□□ -0.4
CLDN11-208ENST00000488989 NUP62P37198 522 aaPredicted RBP12.57□□□□□ -0.4
CLDN11-208ENST00000488989 SULT1A1P50225 295 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 RAB11AP62491 216 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 EWSR1Q01844 656 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLDN11-208ENST00000488989 CFHR3Q02985 330 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 OR2F1Q13607 317 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 Q6ZSV7 163 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
CLDN11-208ENST00000488989 WNT10AQ9GZT5 417 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 MFFQ9GZY8 342 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
CLDN11-208ENST00000488989 PRSS46E5RG02 174 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 G3V318 75 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 HNRNPCP07910 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLDN11-208ENST00000488989 METTL15P1P0C7V9 234 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 CXCL2P19875 107 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 EIF2B2P49770 351 aaKnown RBP12.56□□□□□ -0.4
CLDN11-208ENST00000488989 MFAP2P55001 183 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 LGALSLQ3ZCW2 172 aaPredicted RBP12.56□□□□□ -0.4
CLDN11-208ENST00000488989 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 KCNRGQ8N5I3 272 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
CLDN11-208ENST00000488989 FANCD2OSQ96PS1 177 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
CLDN11-208ENST00000488989 TEP1Q99973 2627 aaKnown RBP12.56□□□□□ -0.4
CLDN11-208ENST00000488989 NF1P21359 2839 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 NDUFA7O95182 113 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 OR8U8P0C7N1 319 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 NHLH2Q02577 135 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 ARL16Q0P5N6 197 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 TMEM95Q3KNT9 176 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 LAMTOR1Q6IAA8 161 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 ETV3LQ6ZN32 361 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 C19orf35Q6ZS72 473 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 STX12Q86Y82 276 aa12.55□□□□□ -0.4
CLDN11-208ENST00000488989 C9orf62Q8N4C0 152 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms