RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CCL13Q99616 98 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 PPIAL4AQ9Y536 164 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 APCP25054 2843 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 GRIFINA4D1Z8 144 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 KRASP01116 189 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 ATP5G3P48201 142 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 UBE2G2P60604 165 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 LCN2P80188 198 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 HSPB7Q9UBY9 170 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 SVEP1Q4LDE5 3571 aa10.89□□□□□ -0.67
CHD1L-208ENST00000488864 TMPRSS2O15393 492 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 HPRT1P00492 218 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 ADMP35318 185 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 GCSAMLQ5JQS6 135 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 FAM216BQ8N7L0 139 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 NEU4Q8WWR8 484 aaPredicted RBP10.88□□□□□ -0.67
CHD1L-208ENST00000488864 R3HDM4Q96D70 268 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 TMEM208Q9BTX3 173 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 TRAPPC2LQ9UL33 140 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 NAV2Q8IVL1 2488 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 FAM90A26D6RGX4 464 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 OVOL3O00110 214 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 NDUFB4O95168 129 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 MBP02144 154 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 AESQ08117 197 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 ZNF816Q0VGE8 651 aaPredicted RBP10.88□□□□□ -0.67
CHD1L-208ENST00000488864 EDDM3AQ14507 147 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 STUMQ69YW2 141 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
CHD1L-208ENST00000488864 ANKRD17O75179 2603 aaKnown RBP10.87□□□□□ -0.67
CHD1L-208ENST00000488864 RBFOX2O43251 390 aaKnown RBP eCLIP10.87□□□□□ -0.673e-13■■■■□ 26.2
CHD1L-208ENST00000488864 NPSP0C0P6 89 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 RPL30P62888 115 aaKnown RBP10.87□□□□□ -0.67
CHD1L-208ENST00000488864 ATP6V1FQ16864 119 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 TEX36Q5VZQ5 186 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 LYPD2Q6UXB3 125 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 C5orf30Q96GV9 206 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 TANC2Q9HCD6 1990 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 TRAV38-1A0A0B4J264 116 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 ODAMA1E959 279 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 YPEL1O60688 119 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 OR3A1P47881 315 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 ZNF497Q6ZNH5 498 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 Q6ZWC4 215 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 OR10P1Q8NGE3 313 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 SGMS2Q8NHU3 365 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 YPEL2Q96QA6 119 aa10.87□□□□□ -0.67
CHD1L-208ENST00000488864 DLEU1O43261 78 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 P0C879 139 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 CDC34P49427 236 aaPredicted RBP10.86□□□□□ -0.67
CHD1L-208ENST00000488864 EFNA4P52798 201 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 LINC00310P59036 64 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 Q8N7P7 452 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 IMMP2LQ96T52 175 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 HNF1AP20823 631 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 FOXL1Q12952 345 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 GOLT1BQ9Y3E0 138 aa10.86□□□□□ -0.67
CHD1L-208ENST00000488864 MALRD1Q5VYJ5 2156 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 S1PR2O95136 353 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 RPLP1P05386 114 aaKnown RBP10.85□□□□□ -0.67
CHD1L-208ENST00000488864 EDDM3BP56851 147 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 BRWD1-AS2P59051 145 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 ZNF788Q6ZQV5 615 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 PERPQ96FX8 193 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 COQ2Q96H96 371 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 CD99P14209 185 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 LINC00205P59089 165 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
CHD1L-208ENST00000488864 DTD1Q8TEA8 209 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 SFRP2Q96HF1 295 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 DCTN5Q9BTE1 182 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 CHODLQ9H9P2 273 aa10.85□□□□□ -0.67
CHD1L-208ENST00000488864 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.85□□□□□ -0.67
CHD1L-208ENST00000488864 C17orf98A8MV24 154 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 FCN3O75636 299 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 ATP5J2P56134 94 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 VWC2Q2TAL6 325 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 TPTE2P1Q5T6R2 138 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 OR2D2Q9H210 308 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 CTSZQ9UBR2 303 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 ITPR2Q14571 2701 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 UNC79Q9P2D8 2635 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 CBLN1P23435 193 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 THBS3P49746 956 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 MSMO1Q15800 293 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 MOB1BQ7L9L4 216 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 MIEN1Q9BRT3 115 aa10.84□□□□□ -0.67
CHD1L-208ENST00000488864 NKX6-3A6NJ46 265 aa10.83□□□□□ -0.68
CHD1L-208ENST00000488864 RNF212BA8MTL3 300 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms