RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 CTRB2Q6GPI1 263 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 TTC9CQ8N5M4 171 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 OR2C3Q8N628 320 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 PPP1R1CQ8WVI7 109 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 MS4A10Q96PG2 267 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
TRAIP-209ENST00000488860 A0A1B0GUS0 222 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 GIPP09681 153 aaPredicted RBP9.64□□□□□ -0.87
TRAIP-209ENST00000488860 PVALBP20472 110 aaPredicted RBP9.64□□□□□ -0.87
TRAIP-209ENST00000488860 PPIFP30405 207 aaKnown RBP9.64□□□□□ -0.87
TRAIP-209ENST00000488860 BCAP31P51572 246 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 PROK1P58294 105 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 TPPP2P59282 170 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 CFHR3Q02985 330 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 AWAT1Q58HT5 328 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 SPANXN5Q5MJ07 72 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 LCNL1Q6ZST4 164 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 C11orf44Q8N8P7 122 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 OR4X2Q8NGF9 303 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 CHAC2Q8WUX2 184 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 MISP3Q96FF7 219 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 CIB3Q96Q77 187 aaPredicted RBP9.64□□□□□ -0.87
TRAIP-209ENST00000488860 P2RX4Q99571 388 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 PSENENQ9NZ42 101 aa9.64□□□□□ -0.87
TRAIP-209ENST00000488860 F11RQ9Y624 299 aaKnown RBP9.64□□□□□ -0.87
TRAIP-209ENST00000488860 OR2J3O76001 311 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 TRGV3P03979 118 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 CRYGCP07315 174 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 OR8U8P0C7N1 319 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 PET100P0DJ07 73 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 RNASE2P10153 161 aaKnown RBP9.63□□□□□ -0.87
TRAIP-209ENST00000488860 NPY1RP25929 384 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 HTR2BP41595 481 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAIP-209ENST00000488860 RAP2BP61225 183 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 RPL23AP62750 156 aaKnown RBP9.63□□□□□ -0.87
TRAIP-209ENST00000488860 IL15RAQ13261 267 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 HIST2H2BDQ6DRA6 164 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 SLC25A24Q6NUK1 477 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 TEX38Q6PEX7 206 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 TMEM65Q6PI78 240 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
TRAIP-209ENST00000488860 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 ZFP57Q9NU63 452 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 OR5AC2Q9NZP5 309 aa9.63□□□□□ -0.87
TRAIP-209ENST00000488860 INS-IGF2F8WCM5 200 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 SMLR1H3BR10 107 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 H3BUA1 57 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 CYB5BO43169 146 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 DEDDO75618 318 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 MPC2O95563 127 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 IGHG4P01861 327 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 RLN2P04090 185 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 CAV2P51636 162 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 MFAP2P55001 183 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 RPP30P78346 268 aaKnown RBP9.62□□□□□ -0.87
TRAIP-209ENST00000488860 SRSF4Q08170 494 aaKnown RBP9.62□□□□□ -0.87
TRAIP-209ENST00000488860 FOXE3Q13461 319 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 ZNF114Q8NC26 417 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 OR1P1Q8NH06 330 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 ASB13Q8WXK3 278 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 OR4C12Q96R67 309 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 RANGRFQ9HD47 186 aaPredicted RBP9.62□□□□□ -0.87
TRAIP-209ENST00000488860 MBD2Q9UBB5 411 aa9.62□□□□□ -0.87
TRAIP-209ENST00000488860 STRAPQ9Y3F4 350 aaKnown RBP9.62□□□□□ -0.87
TRAIP-209ENST00000488860 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 TRAV14DV4A0A0A6YYC5 116 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 IGHV3-21A0A0B4J1V1 117 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 C15orf62A8K5M9 175 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 CCNKO75909 580 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 TMEM50AO95807 157 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 IGLV1-40P01703 118 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 IFNA4P05014 189 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 RPLP1P05386 114 aaKnown RBP9.61□□□□□ -0.87
TRAIP-209ENST00000488860 ELANEP08246 267 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 CD28P10747 220 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 HIST1H1BP16401 226 aaKnown RBP9.61□□□□□ -0.87
TRAIP-209ENST00000488860 PSMB8P28062 276 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 RIPPLY3P57055 190 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 RAB11AP62491 216 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 RHOGP84095 191 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 AKAP14Q86UN6 197 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 COMMD1Q8N668 190 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 OR1L6Q8NGR2 347 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 OR2T35Q8NGX2 323 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 THAP6Q8TBB0 222 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 WFDC12Q8WWY7 111 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 DCUN1D4Q92564 292 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 SMIM8Q96KF7 97 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 SLA2Q9H6Q3 261 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 FBXL7Q9UJT9 491 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 DMRT1Q9Y5R6 373 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms