RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FGF12P61328 243 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 RHOBP62745 196 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 TBR1Q16650 682 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 MGST2Q99735 147 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 HES4Q9HCC6 221 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-229ENST00000488765 CD5LO43866 347 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 CCL4P13236 92 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 CEACAM16Q2WEN9 425 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 SPATA46Q5T0L3 261 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 TREML4Q6UXN2 200 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.41□□□□□ -0.26
MCF2L-229ENST00000488765 C15orf62A8K5M9 175 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 STAG3L2P0CL84 134 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 STAG3L3P0CL85 134 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 FOXL2NBQ6ZUU3 175 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 C10orf35Q96D05 121 aa13.41□□□□□ -0.26
MCF2L-229ENST00000488765 SAA2-SAA4A0A096LPE2 208 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 LEPROTL1O95214 131 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 DLL3Q9NYJ7 618 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 ZNF835Q9Y2P0 537 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 MT-ND6P03923 174 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 ZNF718Q3SXZ3 478 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
MCF2L-229ENST00000488765 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 FAM27BQ5VT28 67 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 TMEM42Q69YG0 159 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 MOB3BQ86TA1 216 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 EFNB3Q15768 340 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
MCF2L-229ENST00000488765 CRYBA4P53673 196 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 FXYD7P58549 80 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 CEACAM21Q3KPI0 293 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 Q6ZR03 302 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 UBALD2Q8IYN6 164 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 OR10W1Q8NGF6 305 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 OR2K2Q8NGT1 345 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 URB1-AS1Q96HZ7 61 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 COMMD5Q9GZQ3 224 aa13.39□□□□□ -0.27
MCF2L-229ENST00000488765 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
MCF2L-229ENST00000488765 GTF2H5Q6ZYL4 71 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 PLEKHA3Q9HB20 300 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-229ENST00000488765 F11RQ9Y624 299 aaKnown RBP13.38□□□□□ -0.27
MCF2L-229ENST00000488765 TRBV9A0A0B4J1U6 114 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 K7ESF4 209 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 SCGB2A2Q13296 93 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 OR10AG1Q8NH19 301 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 GGTLC1Q9BX51 225 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 DEFB126Q9BYW3 111 aa13.38□□□□□ -0.27
MCF2L-229ENST00000488765 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
MCF2L-229ENST00000488765 BRWD1-AS2P59051 145 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 TCF24Q7RTU0 167 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 SLC25A40Q8TBP6 338 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 C5orf30Q96GV9 206 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 HSD17B10Q99714 261 aaKnown RBP13.37□□□□□ -0.27
MCF2L-229ENST00000488765 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 IGHV5-10-1A0A0J9YXX1 117 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 ARF6P62330 175 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 TMEM38BQ9NVV0 291 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 SPCS1Q9Y6A9 102 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-229ENST00000488765 AGFG2O95081 481 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 BPIFA4PQ86YQ2 179 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
MCF2L-229ENST00000488765 TRAV3A0A0B4J244 114 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 A0A0G2JLM5 398 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 A0A0J9YW62 118 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 MRPL21Q7Z2W9 205 aaKnown RBP13.36□□□□□ -0.27
MCF2L-229ENST00000488765 ANKRD37Q7Z713 158 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 C17orf82Q86X59 251 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-229ENST00000488765 NUP35Q8NFH5 326 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 OR2H1Q9GZK4 316 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 ST20Q9HBF5 79 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 LRP4O75096 1905 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 PPIAL4EA0A075B759 164 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 IGHV1-24A0A0C4DH33 117 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 OR9G9P0C7N8 305 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 PPIAL4FP0DN26 164 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 MYOD1P15172 320 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 YRDCQ86U90 279 aaKnown RBP13.36□□□□□ -0.27
MCF2L-229ENST00000488765 SIGMAR1Q99720 223 aa13.36□□□□□ -0.27
MCF2L-229ENST00000488765 ISLRO14498 428 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 P04436 131 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 CKS1BP61024 79 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 C10orf128Q5T292 105 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 CXorf67Q86X51 503 aaPredicted RBP13.35□□□□□ -0.27
MCF2L-229ENST00000488765 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 LINC00473A8K010 186 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 HIGD1CA8MV81 97 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 TMEM54Q969K7 222 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 FOXB1Q99853 325 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 OR51B2Q9Y5P1 312 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 KIR3DS1Q14943 382 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 TRIB1Q96RU8 372 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 SAP30LQ9HAJ7 183 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms