RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RORCP51449 518 aa16.9■□□□□ 0.3
PTPN4-211ENST00000488279 TBC1D26Q86UD7 250 aa16.9■□□□□ 0.3
PTPN4-211ENST00000488279 SLC38A6Q8IZM9 456 aa16.9■□□□□ 0.3
PTPN4-211ENST00000488279 GGTLC1Q9BX51 225 aa16.9■□□□□ 0.3
PTPN4-211ENST00000488279 DAZ1Q9NQZ3 744 aaKnown RBP16.9■□□□□ 0.3
PTPN4-211ENST00000488279 LOC102724200A0A096LPH7 203 aaPredicted RBP16.89■□□□□ 0.29
PTPN4-211ENST00000488279 NDUFA4O00483 81 aa16.89■□□□□ 0.29
PTPN4-211ENST00000488279 HPGDSO60760 199 aa16.89■□□□□ 0.29
PTPN4-211ENST00000488279 ELK1P19419 428 aa16.89■□□□□ 0.29
PTPN4-211ENST00000488279 UCP3P55916 312 aa16.89■□□□□ 0.29
PTPN4-211ENST00000488279 OR2C3Q8N628 320 aa16.89■□□□□ 0.29
PTPN4-211ENST00000488279 UBAC2Q8NBM4 344 aa16.89■□□□□ 0.29
PTPN4-211ENST00000488279 DBX1A6NMT0 343 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 C15orf61A6NNL5 157 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 K7EIM0 57 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 Q56UQ5 140 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 LAMTOR1Q6IAA8 161 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 H2BFWTQ7Z2G1 175 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 OR1P1Q8NH06 330 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 OR4A16Q8NH70 328 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 SPAG8Q99932 426 aaPredicted RBP16.88■□□□□ 0.29
PTPN4-211ENST00000488279 CHRDL1Q9BU40 450 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 C20orf24Q9BUV8 137 aa16.88■□□□□ 0.29
PTPN4-211ENST00000488279 MZT2AQ6P582 158 aa16.87■□□□□ 0.29
PTPN4-211ENST00000488279 SEC22AQ96IW7 307 aa16.87■□□□□ 0.29
PTPN4-211ENST00000488279 F8W735 103 aaPredicted RBP16.86■□□□□ 0.29
PTPN4-211ENST00000488279 K7EMT4 169 aa16.86■□□□□ 0.29
PTPN4-211ENST00000488279 TSPAN4O14817 238 aa16.86■□□□□ 0.29
PTPN4-211ENST00000488279 FAM25AB3EWG3 89 aa16.85■□□□□ 0.29
PTPN4-211ENST00000488279 FAM25CB3EWG5 89 aa16.85■□□□□ 0.29
PTPN4-211ENST00000488279 FAM25GB3EWG6 89 aa16.85■□□□□ 0.29
PTPN4-211ENST00000488279 ADMP35318 185 aa16.85■□□□□ 0.29
PTPN4-211ENST00000488279 AP3S1Q92572 193 aa16.85■□□□□ 0.29
PTPN4-211ENST00000488279 C15orf62A8K5M9 175 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 M0QYG6 137 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 NUPL2O15504 423 aaKnown RBP16.84■□□□□ 0.29
PTPN4-211ENST00000488279 IGKV1-39P01597 117 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 IGKV1D-39P04432 117 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 CTSGP08311 255 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 RELQ04864 619 aaPredicted RBP16.84■□□□□ 0.29
PTPN4-211ENST00000488279 MRGPRFQ96AM1 343 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 MISP3Q96FF7 219 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 OVOL2Q9BRP0 275 aa16.84■□□□□ 0.29
PTPN4-211ENST00000488279 IGHV3OR16-8A0A075B7F1 116 aa16.83■□□□□ 0.28
PTPN4-211ENST00000488279 ZNF207O43670 478 aaKnown RBP16.83■□□□□ 0.28
PTPN4-211ENST00000488279 MFAP4P55083 255 aa16.83■□□□□ 0.28
PTPN4-211ENST00000488279 HSPE1P61604 102 aaKnown RBP16.83■□□□□ 0.28
PTPN4-211ENST00000488279 ERHP84090 104 aaKnown RBP16.83■□□□□ 0.28
PTPN4-211ENST00000488279 TXN2Q99757 166 aa16.83■□□□□ 0.28
PTPN4-211ENST00000488279 KLK11Q9UBX7 282 aa16.83■□□□□ 0.28
PTPN4-211ENST00000488279 I3L2K1 104 aa16.82■□□□□ 0.28
PTPN4-211ENST00000488279 JTBO76095 146 aa16.82■□□□□ 0.28
PTPN4-211ENST00000488279 PGAM2P15259 253 aa16.82■□□□□ 0.28
PTPN4-211ENST00000488279 APOC4P55056 127 aa16.82■□□□□ 0.28
PTPN4-211ENST00000488279 PRCDQ00LT1 54 aa16.82■□□□□ 0.28
PTPN4-211ENST00000488279 RNASE10Q5GAN6 216 aaKnown RBP16.82■□□□□ 0.28
PTPN4-211ENST00000488279 ZNF486Q96H40 463 aaPredicted RBP16.82■□□□□ 0.28
PTPN4-211ENST00000488279 UBQLN2Q9UHD9 624 aa16.82■□□□□ 0.28
PTPN4-211ENST00000488279 YIF1AO95070 293 aa16.81■□□□□ 0.28
PTPN4-211ENST00000488279 ZNF182P17025 639 aaPredicted RBP16.81■□□□□ 0.28
PTPN4-211ENST00000488279 FCGR2BP31994 310 aaPredicted RBP16.81■□□□□ 0.28
PTPN4-211ENST00000488279 RND3P61587 244 aa16.81■□□□□ 0.28
PTPN4-211ENST00000488279 CTF1Q16619 201 aa16.81■□□□□ 0.28
PTPN4-211ENST00000488279 RNASE12Q5GAN4 147 aaKnown RBP16.81■□□□□ 0.28
PTPN4-211ENST00000488279 ZNF114Q8NC26 417 aa16.81■□□□□ 0.28
PTPN4-211ENST00000488279 SMPXQ9UHP9 88 aa16.81■□□□□ 0.28
PTPN4-211ENST00000488279 DNAH1Q9P2D7 4330 aa16.81■□□□□ 0.28
PTPN4-211ENST00000488279 OR4C46A6NHA9 309 aa16.8■□□□□ 0.28
PTPN4-211ENST00000488279 MT-CO2P00403 227 aa16.8■□□□□ 0.28
PTPN4-211ENST00000488279 PIGPP57054 158 aa16.8■□□□□ 0.28
PTPN4-211ENST00000488279 ARRDC1Q8N5I2 433 aa16.8■□□□□ 0.28
PTPN4-211ENST00000488279 OR52I2Q8NH67 350 aa16.8■□□□□ 0.28
PTPN4-211ENST00000488279 NAA50Q9GZZ1 169 aaKnown RBP16.8■□□□□ 0.28
PTPN4-211ENST00000488279 EXTL2Q9UBQ6 330 aa16.8■□□□□ 0.28
PTPN4-211ENST00000488279 GABARAPO95166 117 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 CD3DP04234 171 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 CTSDP07339 412 aaPredicted RBP16.79■□□□□ 0.28
PTPN4-211ENST00000488279 PI3P19957 117 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 TBPP20226 339 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 Q6ZWC4 215 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 LHFPL1Q86WI0 220 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 C15orf40Q8WUR7 153 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 PINX1Q96BK5 328 aaKnown RBP16.79■□□□□ 0.28
PTPN4-211ENST00000488279 NXF2Q9GZY0 626 aaKnown RBP16.79■□□□□ 0.28
PTPN4-211ENST00000488279 MTFP1Q9UDX5 166 aa16.79■□□□□ 0.28
PTPN4-211ENST00000488279 IGHV7-4-1A0A0J9YVY3 117 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 UBE2CO00762 179 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 ATG12O94817 140 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 IGHV3-48P01763 117 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 TMEM116Q8NCL8 245 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 OR10C1Q96KK4 312 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 RHPN1-AS1Q9BWJ2 59 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 TP53TG1Q9Y2A0 90 aa16.78■□□□□ 0.28
PTPN4-211ENST00000488279 TRAV14DV4A0A0A6YYC5 116 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 CHEK1O14757 476 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 SPRY2O43597 315 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 GNG7O60262 68 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 SNCAP37840 140 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 IZUMO4Q1ZYL8 232 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 ODF3L2Q3SX64 289 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms