RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 OR4C12Q96R67 309 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 PFDN5Q99471 154 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 NICN1Q9BSH3 213 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 FAAP24Q9BTP7 215 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 NKX6-2Q9C056 277 aaPredicted RBP4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 CST11Q9H112 138 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 HIPK2Q9H2X6 1198 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 ZNF355PQ9NSJ1 428 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 RNF150Q9ULK6 438 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 SSR3Q9UNL2 185 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 NUBP2Q9Y5Y2 271 aa4.83□□□□□ -1.64
TNFSF4-203ENST00000488053 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 LCE6AA0A183 80 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 H0YJW9 148 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 NDUFS6O75380 124 aaKnown RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 NDUFB4O95168 129 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 HLA-DQB1P01920 261 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 TRGV3P03979 118 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 HSPB1P04792 205 aaKnown RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 PRSS2P07478 247 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 GADD45AP24522 165 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 HTD2P86397 168 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 TMEM267Q0VDI3 215 aaPredicted RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 GUCA2BQ16661 112 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 DNLZQ5SXM8 178 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 ZNF660Q6AZW8 331 aaPredicted RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 UQCC3Q6UW78 93 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 AHSA2Q719I0 299 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 LYPD6Q86Y78 171 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 MS4A15Q8N5U1 240 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 NKAIN3Q8N8D7 197 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 ZNF485Q8NCK3 441 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 DMBX1Q8NFW5 382 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 OR5T1Q8NG75 326 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 FLYWCH2Q96CP2 140 aaKnown RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 ZNF479Q96JC4 524 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 TM2D3Q9BRN9 247 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 HDHD3Q9BSH5 251 aaPredicted RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 CNOT2Q9NZN8 540 aaKnown RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 PIPOXQ9P0Z9 390 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 ABRACLQ9P1F3 81 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 OR1A1Q9P1Q5 309 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 METTL1Q9UBP6 276 aaKnown RBP4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 WASHC3Q9Y3C0 194 aa4.82□□□□□ -1.64
TNFSF4-203ENST00000488053 A0A0A6YYD4 124 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 OR5H14A6NHG9 310 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 RAB29O14966 203 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 ARPC1BO15143 372 aaKnown RBP4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 LDLRAD4O15165 306 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 HSPA12AO43301 675 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 LYRM1O43325 122 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 EIF3GO75821 320 aaKnown RBP eCLIP4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 RBBP9O75884 186 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 APOC3P02656 99 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 APELAP0DMC3 54 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 HTR2CP28335 458 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 SDC2P34741 201 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 GPX4P36969 197 aaPredicted RBP4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 CEACAM6P40199 344 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 TAS2R43P59537 309 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 RPS27AP62979 156 aaKnown RBP4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 UNC119Q13432 240 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 OPCMLQ14982 345 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 PSG5Q15238 335 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 P2RY14Q15391 338 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 PYDC2Q56P42 97 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 LY6G6FQ5SQ64 297 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 SAPCD1Q5SSQ6 148 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 CD200R1LQ6Q8B3 271 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 LRRTM1Q86UE6 522 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 SGPP2Q8IWX5 399 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 SVBPQ8N300 66 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 TCTEX1D1Q8N7M0 179 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 ZNF383Q8NA42 475 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 GLYATL2Q8WU03 294 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 TMED9Q9BVK6 235 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 TMEM59Q9BXS4 323 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 PLEKHJ1Q9NW61 149 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 AK3Q9UIJ7 227 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 V9GYH0 126 aa4.81□□□□□ -1.64
TNFSF4-203ENST00000488053 LOC100506127A0A0U1RQW1 187 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 C13orf42A0A1B0GVH6 325 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 C7orf66A4D0T2 115 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 C1orf196B1AJZ1 125 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 UBE2CO00762 179 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 SOCS1O15524 211 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 HPGDSO60760 199 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 CNIH1O95406 144 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 NAPSAO96009 420 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 IGLV1-51P01701 117 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 TRBV12-3P01733 135 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 IGKV1-16P04430 117 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 SCTP09683 121 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 FOLR2P14207 255 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 EDN2P20800 178 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 PSMA1P25786 263 aaKnown RBP4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 MC5RP33032 325 aa4.8□□□□□ -1.64
TNFSF4-203ENST00000488053 WNT4P56705 351 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms