RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 FAM212BQ9NTI7 297 aaPredicted RBP17.68■□□□□ 0.42
PLOD3-215ENST00000487563 TENM2Q9NT68 2774 aa17.68■□□□□ 0.42
PLOD3-215ENST00000487563 MFAP2P55001 183 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 RNASE12Q5GAN4 147 aaKnown RBP17.67■□□□□ 0.42
PLOD3-215ENST00000487563 H2BFWTQ7Z2G1 175 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 OR4A16Q8NH70 328 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 SCARB1Q8WTV0 552 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 C20orf24Q9BUV8 137 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 GGTLC1Q9BX51 225 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 DAZ1Q9NQZ3 744 aaKnown RBP17.67■□□□□ 0.42
PLOD3-215ENST00000487563 TMEM14BQ9NUH8 114 aa17.67■□□□□ 0.42
PLOD3-215ENST00000487563 UCP3P55916 312 aa17.66■□□□□ 0.42
PLOD3-215ENST00000487563 AP3S1Q92572 193 aa17.66■□□□□ 0.42
PLOD3-215ENST00000487563 ATP6V0BQ99437 205 aa17.66■□□□□ 0.42
PLOD3-215ENST00000487563 LOC102724200A0A096LPH7 203 aaPredicted RBP17.65■□□□□ 0.42
PLOD3-215ENST00000487563 DBX1A6NMT0 343 aa17.65■□□□□ 0.42
PLOD3-215ENST00000487563 M0QYG6 137 aa17.65■□□□□ 0.42
PLOD3-215ENST00000487563 NDUFA4O00483 81 aa17.65■□□□□ 0.42
PLOD3-215ENST00000487563 PGAM2P15259 253 aa17.65■□□□□ 0.42
PLOD3-215ENST00000487563 SPAG8Q99932 426 aaPredicted RBP17.65■□□□□ 0.42
PLOD3-215ENST00000487563 CHRDL1Q9BU40 450 aa17.65■□□□□ 0.42
PLOD3-215ENST00000487563 C5orf66Q9H5L9 145 aa17.65■□□□□ 0.42
PLOD3-215ENST00000487563 SACSQ9NZJ4 4579 aa17.64■□□□□ 0.42
PLOD3-215ENST00000487563 K7EIM0 57 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 RNASE10Q5GAN6 216 aaKnown RBP17.64■□□□□ 0.41
PLOD3-215ENST00000487563 LAMTOR1Q6IAA8 161 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 OR2C3Q8N628 320 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 OR1P1Q8NH06 330 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 MRGPRFQ96AM1 343 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 MISP3Q96FF7 219 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 SEC22AQ96IW7 307 aa17.64■□□□□ 0.41
PLOD3-215ENST00000487563 IGHV3OR16-8A0A075B7F1 116 aa17.63■□□□□ 0.41
PLOD3-215ENST00000487563 RYR2Q92736 4967 aa17.63■□□□□ 0.41
PLOD3-215ENST00000487563 STARD9Q9P2P6 4700 aa17.63■□□□□ 0.41
PLOD3-215ENST00000487563 ZNF207O43670 478 aaKnown RBP17.62■□□□□ 0.41
PLOD3-215ENST00000487563 EXTL2Q9UBQ6 330 aa17.62■□□□□ 0.41
PLOD3-215ENST00000487563 F8W735 103 aaPredicted RBP17.61■□□□□ 0.41
PLOD3-215ENST00000487563 TSPAN4O14817 238 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 NUPL2O15504 423 aaKnown RBP17.61■□□□□ 0.41
PLOD3-215ENST00000487563 IGKV1-39P01597 117 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 IGKV1D-39P04432 117 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 ADMP35318 185 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 PRCDQ00LT1 54 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 RELQ04864 619 aaPredicted RBP17.61■□□□□ 0.41
PLOD3-215ENST00000487563 NAA50Q9GZZ1 169 aaKnown RBP17.61■□□□□ 0.41
PLOD3-215ENST00000487563 KLK11Q9UBX7 282 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 UBQLN2Q9UHD9 624 aa17.61■□□□□ 0.41
PLOD3-215ENST00000487563 GABARAPO95166 117 aa17.6■□□□□ 0.41
PLOD3-215ENST00000487563 ZNF182P17025 639 aaPredicted RBP17.6■□□□□ 0.41
PLOD3-215ENST00000487563 MFAP4P55083 255 aa17.6■□□□□ 0.41
PLOD3-215ENST00000487563 ZNF486Q96H40 463 aaPredicted RBP17.6■□□□□ 0.41
PLOD3-215ENST00000487563 OR4C46A6NHA9 309 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 K7EMT4 169 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 YIF1AO95070 293 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 PI3P19957 117 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 AKR1C2P52895 323 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 PIGPP57054 158 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 RND3P61587 244 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 HSPE1P61604 102 aaKnown RBP17.59■□□□□ 0.41
PLOD3-215ENST00000487563 ERHP84090 104 aaKnown RBP17.59■□□□□ 0.41
PLOD3-215ENST00000487563 CTF1Q16619 201 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 ARRDC1Q8N5I2 433 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 OR52I2Q8NH67 350 aa17.59■□□□□ 0.41
PLOD3-215ENST00000487563 PINX1Q96BK5 328 aaKnown RBP17.59■□□□□ 0.41
PLOD3-215ENST00000487563 C15orf62A8K5M9 175 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 JTBO76095 146 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 CD3DP04234 171 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 CTSGP08311 255 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 SMIM18P0DKX4 95 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 TBPP20226 339 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 PPP5CP53041 499 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 APOC4P55056 127 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 GPR107Q5VW38 600 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 ZNF114Q8NC26 417 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 C15orf40Q8WUR7 153 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 CSMD3Q7Z407 3707 aa17.58■□□□□ 0.4
PLOD3-215ENST00000487563 I3L2K1 104 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 ATG12O94817 140 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 MT-CO2P00403 227 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 SPINK9Q5DT21 86 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 SLC35G3Q8N808 338 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 TXN2Q99757 166 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 OVOL2Q9BRP0 275 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 MTFP1Q9UDX5 166 aa17.57■□□□□ 0.4
PLOD3-215ENST00000487563 GNG7O60262 68 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 IGHV3-48P01763 117 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 CTSDP07339 412 aaPredicted RBP17.56■□□□□ 0.4
PLOD3-215ENST00000487563 IZUMO4Q1ZYL8 232 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 TRIM16LQ309B1 348 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 LHFPL1Q86WI0 220 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 CCDC71LQ8N9Z2 235 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 TP53RKQ96S44 253 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 PDCD10Q9BUL8 212 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 COPZ2Q9P299 210 aa17.56■□□□□ 0.4
PLOD3-215ENST00000487563 SNCAP37840 140 aa17.55■□□□□ 0.4
PLOD3-215ENST00000487563 ODF3L2Q3SX64 289 aa17.55■□□□□ 0.4
PLOD3-215ENST00000487563 SCGB2B2Q4G0G5 96 aa17.55■□□□□ 0.4
PLOD3-215ENST00000487563 TMEM116Q8NCL8 245 aa17.55■□□□□ 0.4
PLOD3-215ENST00000487563 RNASE11Q8TAA1 199 aaKnown RBP17.55■□□□□ 0.4
PLOD3-215ENST00000487563 ZFAND1Q8TCF1 268 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms