RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 WT1-ASQ06250 92 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 NSUN5P1Q3KNT7 163 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 SPINK9Q5DT21 86 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 GGNBP1Q5YKI7 109 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 CTRB2Q6GPI1 263 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 REC114Q7Z4M0 266 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 NDUFA11Q86Y39 141 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 C12orf45Q8N5I9 185 aaPredicted RBP8.31□□□□□ -1.08
TOP3B-216ENST00000487485 UXS1Q8NBZ7 420 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 OR52E5Q8NH55 327 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 SLA2Q9H6Q3 261 aa8.31□□□□□ -1.08
TOP3B-216ENST00000487485 GPN1Q9HCN4 374 aaPredicted RBP8.31□□□□□ -1.08
TOP3B-216ENST00000487485 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 NXPH3O95157 252 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 BRI3O95415 125 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 IFNA21P01568 189 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 TRGV3P03979 118 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 SLC25A6P12236 298 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 DEFA4P12838 97 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 CDX1P47902 265 aaPredicted RBP8.3□□□□□ -1.08
TOP3B-216ENST00000487485 TPPP2P59282 170 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 SPCS3P61009 180 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 RPL23AP62750 156 aaKnown RBP8.3□□□□□ -1.08
TOP3B-216ENST00000487485 ERHP84090 104 aaKnown RBP8.3□□□□□ -1.08
TOP3B-216ENST00000487485 KIAA0141Q14154 515 aaPredicted RBP8.3□□□□□ -1.08
TOP3B-216ENST00000487485 RGS21Q2M5E4 152 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 AARDQ4LEZ3 155 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 C19orf35Q6ZS72 473 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 ZNF491Q8N8L2 437 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 MYOZ3Q8TDC0 251 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 PLEKHA3Q9HB20 300 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 CACFD1Q9UGQ2 172 aa8.3□□□□□ -1.08
TOP3B-216ENST00000487485 MPTX1A8MV57 137 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 SNRPGP15A8MWD9 76 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 PITX3O75364 302 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 HOXA1P49639 335 aaPredicted RBP8.29□□□□□ -1.08
TOP3B-216ENST00000487485 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 MRPL41Q8IXM3 137 aaKnown RBP8.29□□□□□ -1.08
TOP3B-216ENST00000487485 OR2C3Q8N628 320 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 KLHL30-AS1Q8NEE0 82 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 ENY2Q9NPA8 101 aa8.29□□□□□ -1.08
TOP3B-216ENST00000487485 TRBV9A0A0B4J1U6 114 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 A0A0G2JLM5 398 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 C13orf42A0A1B0GVH6 325 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 NUDT19A8MXV4 375 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 INS-IGF2F8WCM5 200 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 OR2J3O76001 311 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 HIST1H1BP16401 226 aaKnown RBP8.28□□□□□ -1.08
TOP3B-216ENST00000487485 RHOGP84095 191 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 DEFA5Q01523 94 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 TNFRSF9Q07011 255 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 SLC25A24Q6NUK1 477 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 USMG5Q96IX5 58 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 OR10C1Q96KK4 312 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 FANCD2OSQ96PS1 177 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 P2RX4Q99571 388 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 RBKSQ9H477 322 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 GNB4Q9HAV0 340 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 AURKAIP1Q9NWT8 199 aaPredicted RBP8.28□□□□□ -1.08
TOP3B-216ENST00000487485 HSPB7Q9UBY9 170 aa8.28□□□□□ -1.08
TOP3B-216ENST00000487485 F11RQ9Y624 299 aaKnown RBP8.28□□□□□ -1.08
TOP3B-216ENST00000487485 IGLV11-55A0A075B6I3 123 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 FAM223BA6NKX1 122 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 FAM25EA8MYX2 175 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 FAM90A26D6RGX4 464 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 CCSO14618 274 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 CYB5BO43169 146 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 IGHV3-11P01762 117 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 SNCAP37840 140 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 MFAP2P55001 183 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 ATP5G2Q06055 141 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 TATDN3Q17R31 274 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 IAH1Q2TAA2 248 aaPredicted RBP8.27□□□□□ -1.09
TOP3B-216ENST00000487485 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 C8orf86Q6ZUL3 223 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 FAM223AQ8IWN6 122 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 NECAP1Q8NC96 275 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 OR1L6Q8NGR2 347 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 OR5B12Q96R08 314 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 HIPK2Q9H2X6 1198 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 HEYLQ9NQ87 328 aaPredicted RBP8.27□□□□□ -1.09
TOP3B-216ENST00000487485 THYN1Q9P016 225 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 FBXL7Q9UJT9 491 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 KLK9Q9UKQ9 250 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 DMRT1Q9Y5R6 373 aa8.27□□□□□ -1.09
TOP3B-216ENST00000487485 C5orf51A6NDU8 294 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 I3L521 148 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 NDUFB8O95169 186 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 LGALS1P09382 135 aaKnown RBP8.26□□□□□ -1.09
TOP3B-216ENST00000487485 SUB1P53999 127 aaKnown RBP eCLIP8.26□□□□□ -1.09
TOP3B-216ENST00000487485 OXA1LQ15070 435 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 C15orf32Q32M92 178 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 C11orf87Q6NUJ2 197 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 GSG1LQ6UXU4 331 aa8.26□□□□□ -1.09
TOP3B-216ENST00000487485 ZBTB8BQ8NAP8 495 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms