RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RUNX1Q01196 453 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 LOXL1Q08397 574 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-206ENST00000487062 EBI3Q14213 229 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 AANATQ16613 207 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 LDLRAD2Q5SZI1 272 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 PXDC1Q5TGL8 231 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 EIF4E3Q8N5X7 224 aaKnown RBP5.65□□□□□ -1.5
SF3A3-206ENST00000487062 COMMD1Q8N668 190 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 LINC01356Q8N9X3 169 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 LFNGQ8NES3 379 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 NPBQ8NG41 125 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 MARC2Q969Z3 335 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 RBMXL1Q96E39 390 aaKnown RBP5.65□□□□□ -1.5
SF3A3-206ENST00000487062 RITA1Q96K30 269 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 SRSF8Q9BRL6 282 aaKnown RBP5.65□□□□□ -1.5
SF3A3-206ENST00000487062 FBXL15Q9H469 300 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 NPVFQ9HCQ7 196 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 KCNIP2Q9NS61 270 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 C1RLQ9NZP8 487 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 WDR83OSQ9Y284 106 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 FAM208BQ5VWN6 2430 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 IGHV1-69DA0A0B4J2H0 117 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 MFSD2BA6NFX1 497 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 PRSS46E5RG02 174 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 I3L521 148 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 J3QLI3 93 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 CNIH1O95406 144 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 IGHV1-69P01742 117 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 HBE1P02100 147 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 H2AFB1P0C5Y9 115 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 OR13C7P0DN81 318 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 TMEM11P17152 192 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 SAA4P35542 130 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 GPX4P36969 197 aaPredicted RBP5.64□□□□□ -1.51
SF3A3-206ENST00000487062 KRTAP10-9P60411 292 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 GNB1P62873 340 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 ZNF616Q08AN1 781 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 PJVKQ0ZLH3 352 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 RAB31Q13636 194 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 HNF4GQ14541 408 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 BSXQ3C1V8 233 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 TMEM41BQ5BJD5 291 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 PRSS57Q6UWY2 283 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 BTNL8Q6UX41 500 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 CENPVQ7Z7K6 275 aaPredicted RBP5.64□□□□□ -1.51
SF3A3-206ENST00000487062 DYNAPQ8N1N2 210 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 OR10W1Q8NGF6 305 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 FAM213BQ8TBF2 198 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 RNASEH2CQ8TDP1 164 aaKnown RBP5.64□□□□□ -1.51
SF3A3-206ENST00000487062 CACNG8Q8WXS5 425 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 MBD6Q96DN6 1003 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 RSG1Q9BU20 258 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 REG4Q9BYZ8 158 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 HRH4Q9H3N8 390 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 C7orf69Q9H7B7 122 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 TPSG1Q9NRR2 321 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 HIF1ANQ9NWT6 349 aa5.64□□□□□ -1.51
SF3A3-206ENST00000487062 WNK2Q9Y3S1 2297 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 TRAV40A0A0B4J280 105 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 BTBD17A6NE02 478 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 NCBP2LA6PVI3 153 aaKnown RBP5.63□□□□□ -1.51
SF3A3-206ENST00000487062 KRBOX1C9JBD0 128 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 CORTO00230 105 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 MDKP21741 143 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-206ENST00000487062 AKR1C1Q04828 323 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 WT1-ASQ06250 92 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 CD69Q07108 199 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 C5orf64Q2M2E5 130 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 MRGPRG-AS1Q2M3A8 158 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 ACOT6Q3I5F7 207 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-206ENST00000487062 FFAR4Q5NUL3 377 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 Q5PR19 223 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 C10orf55Q5SWW7 151 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 ETFRF1Q6IPR1 90 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 TEPPQ6URK8 271 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 TREML4Q6UXN2 200 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 Q8N6K4 173 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 ZNF114Q8NC26 417 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 OR1L6Q8NGR2 347 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 LYPD6BQ8NI32 183 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 ABHD5Q8WTS1 349 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 TMEM170AQ8WVE7 144 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 SRSF12Q8WXF0 261 aaKnown RBP5.63□□□□□ -1.51
SF3A3-206ENST00000487062 C22orf15Q8WYQ4 148 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 SLC35E1Q96K37 410 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 NPCDR1Q9BY65 106 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 CDIP1Q9H305 208 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 FAM96BQ9Y3D0 163 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 AKAP6Q13023 2319 aa5.63□□□□□ -1.51
SF3A3-206ENST00000487062 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
SF3A3-206ENST00000487062 TNCP24821 2201 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 IGLC7A0M8Q6 106 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 CGB1A6NKQ9 187 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 E7EUB6 86 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 CYB5BO43169 146 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 FBP1P09467 338 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 CD24P25063 80 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 OPRK1P41145 380 aa5.62□□□□□ -1.51
SF3A3-206ENST00000487062 ELLP55199 621 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms