RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 K7EQM0 130 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 PDE6DO43924 150 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 MPDU1O75352 247 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CRYBB3P26998 211 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CDKN1AP38936 164 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 OR2T6Q8NHC8 308 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 HSPB7Q9UBY9 170 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 RNF24Q9Y225 148 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 EML5Q05BV3 1969 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 NUP210LQ5VU65 1888 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 PGPEP1LA6NFU8 196 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CLN5O75503 358 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 IL6RP08887 468 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 LYL1P12980 280 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
HMGN1-216ENST00000486741 HIF1ANQ9NWT6 349 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 MC5RP33032 325 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CSN1S1P47710 185 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 ECSCRQ19T08 205 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 Q6ZS49 121 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 LHFPL4Q7Z7J7 247 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 RASL11BQ9BPW5 248 aa10.95□□□□□ -0.66
HMGN1-216ENST00000486741 CFAP54Q96N23 3096 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 TRBV6-6A0A0A6YYG2 114 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 PMCHP20382 165 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 IER3P46695 156 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 ERVK11-1P61568 191 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 SPRNQ5BIV9 151 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
HMGN1-216ENST00000486741 ZNF596Q8TC21 504 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 C1QTNF9BB2RNN3 333 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 FXYD3Q14802 87 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 ADIPOQQ15848 244 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-216ENST00000486741 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 VPS13AQ96RL7 3174 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 IGKV3-7A0A075B6H7 116 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 CGAP01215 116 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 USF1P22415 310 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-216ENST00000486741 PAX5Q02548 391 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 MS4A10Q96PG2 267 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 PAXXQ9BUH6 204 aa10.94□□□□□ -0.66
HMGN1-216ENST00000486741 BARX1Q9HBU1 254 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-216ENST00000486741 HNRNPA3P51991 378 aaKnown RBP10.93□□□□□ -0.66
HMGN1-216ENST00000486741 CRIP3Q6Q6R5 217 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 LYPD2Q6UXB3 125 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 TMEM186Q96B77 213 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 VAMP8Q9BV40 100 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 DKK4Q9UBT3 224 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 SERTM2A0A1B0GWG4 89 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 CLEC7AQ9BXN2 247 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 SPEGQ15772 3267 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 CHEK1O14757 476 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 NDUFA2O43678 99 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 HTR1DP28221 377 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 PQLC2Q6ZP29 291 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 MMD2Q8IY49 270 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 PTPN13Q12923 2485 aa10.93□□□□□ -0.66
HMGN1-216ENST00000486741 ZNF785A8K8V0 405 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 PAX9P55771 341 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 IL15RAQ13261 267 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 WDFY4Q6ZS81 3184 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 IGHV3OR16-8A0A075B7F1 116 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 DLL1O00548 723 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 CLEC3BP05452 202 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 OR4F17Q8NGA8 305 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 ZCCHC14Q8WYQ9 949 aaKnown RBP10.92□□□□□ -0.66
HMGN1-216ENST00000486741 RPUSD1Q9UJJ7 312 aaKnown RBP10.92□□□□□ -0.66
HMGN1-216ENST00000486741 TM4SF5O14894 197 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 IGKV1-16P04430 117 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 GCHFRP30047 84 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 MLANAQ16655 118 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 KHDC1LQ5JSQ8 128 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 MIR17HGQ75NE6 70 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 REC114Q7Z4M0 266 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 ANAPC16Q96DE5 110 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 SRD5A3Q9H8P0 318 aa10.92□□□□□ -0.66
HMGN1-216ENST00000486741 RPEL1Q2QD12 228 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 LURAP1LQ8IV03 231 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 P2RX4Q99571 388 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 LCN2P80188 198 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 SIGLECL1Q8N7X8 197 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 PAM16Q9Y3D7 125 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 SNURFLB1AK76 121 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 S100A7P31151 101 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 Q8WTZ3 238 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 GAFA1Q96PS6 74 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 VKORC1Q9BQB6 163 aa10.91□□□□□ -0.66
HMGN1-216ENST00000486741 LOC105371242A0A075B767 164 aa10.9□□□□□ -0.66
HMGN1-216ENST00000486741 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
HMGN1-216ENST00000486741 F2RL2O00254 374 aa10.9□□□□□ -0.66
HMGN1-216ENST00000486741 HYPMO75409 117 aa10.9□□□□□ -0.66
HMGN1-216ENST00000486741 RPLP1P05386 114 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms