RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 SP9P0CG40 484 aa7.44□□□□□ -1.22
GABRE-209ENST00000486255 GFI1BQ5VTD9 330 aa7.44□□□□□ -1.22
GABRE-209ENST00000486255 ZNF826PQ6ZT77 177 aa7.44□□□□□ -1.22
GABRE-209ENST00000486255 SHISA5Q8N114 240 aa7.44□□□□□ -1.22
GABRE-209ENST00000486255 OR9G4Q8NGQ1 327 aa7.44□□□□□ -1.22
GABRE-209ENST00000486255 APOBEC4Q8WW27 367 aaKnown RBP7.44□□□□□ -1.22
GABRE-209ENST00000486255 RNASE7Q9H1E1 156 aaKnown RBP7.44□□□□□ -1.22
GABRE-209ENST00000486255 PDE4DIPQ5VU43 2346 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 TDGF1P3P51864 188 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 CCL8P80075 99 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 SRSF3P84103 164 aaKnown RBP7.43□□□□□ -1.22
GABRE-209ENST00000486255 TMEM42Q69YG0 159 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 DRAM1Q8N682 238 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 NRTNQ99748 197 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 PLA2G2FQ9BZM2 168 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 IFI27L2Q9H2X8 130 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 TRIP11Q15643 1979 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 CDK2AP2O75956 126 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 SLC25A47Q6Q0C1 308 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 UNQ9370/PRO34162Q6UXP9 181 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 MIR17HGQ75NE6 70 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 CIARTQ8N365 385 aaPredicted RBP7.43□□□□□ -1.22
GABRE-209ENST00000486255 GNB1LQ9BYB4 327 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 TTTY12Q9BZ98 90 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 WDR81Q562E7 1941 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 CENPVL1A0A0U1RR11 272 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 WISP3O95389 354 aaPredicted RBP7.43□□□□□ -1.22
GABRE-209ENST00000486255 PLNP26678 52 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 ATP5IP56385 69 aaPredicted RBP7.43□□□□□ -1.22
GABRE-209ENST00000486255 C9orf153Q5TBE3 101 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 ASPHD2Q6ICH7 369 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 CD200R1LQ6Q8B3 271 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 FGF11Q92914 225 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 VWC2LB2RUY7 222 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 IFNL4K9M1U5 179 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 EGR4Q05215 589 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 TMEM186Q96B77 213 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 AMELYQ99218 206 aa7.43□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
GABRE-209ENST00000486255 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 CCL21O00585 134 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 NPC2P61916 151 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 OTORQ9NRC9 128 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 SPINT1O43278 529 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 NAPSAO96009 420 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 LY6EQ16553 131 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 C2orf82Q6UX34 121 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 RTN4RL2Q86UN3 420 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST3H2BBQ8N257 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 MIA3Q5JRA6 1907 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 PSG1P11464 419 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 EVI2AP22794 236 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 TMEM30BQ3MIR4 351 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 OR52E5Q8NH55 327 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 TNFRSF14Q92956 283 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 HIST1H2BLQ99880 126 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 MSGN1A6NI15 193 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 TTC3P53804 2025 aa7.42□□□□□ -1.22
GABRE-209ENST00000486255 IGKV1D-42A0A075B6H8 117 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.41□□□□□ -1.22
GABRE-209ENST00000486255 A0A1W2PPV9 198 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 GZMBP10144 247 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 NAA38Q9BRA0 125 aaKnown RBP7.41□□□□□ -1.22
GABRE-209ENST00000486255 GNG5P63218 68 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 UBE2V1Q13404 147 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 KCNK17Q96T54 332 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 TRAV14DV4A0A0A6YYC5 116 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 PPIAL4CA0A0B4J2A2 164 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 IGHV1OR15-9A0A0B4J2B8 117 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 PIN1P1O15428 100 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 PPIAL4GP0DN37 164 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 CD28P10747 220 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 TMEM171Q8WVE6 324 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 DLX4Q92988 240 aaPredicted RBP7.41□□□□□ -1.22
GABRE-209ENST00000486255 SPANXA1Q9NS26 97 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 FOXA2Q9Y261 457 aaPredicted RBP7.41□□□□□ -1.22
GABRE-209ENST00000486255 IGLV1-36A0A0B4J1U3 117 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 HEPN1Q6WQI6 88 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 LOXL4Q96JB6 756 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 C1QTNF9P0C862 333 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 CSRP3P50461 194 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 PRSS53Q2L4Q9 553 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 RPL39P5Q59GN2 51 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 GP6Q9HCN6 339 aa7.41□□□□□ -1.22
GABRE-209ENST00000486255 ZFC3H1O60293 1989 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms