RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 RTBDNQ9BSG5 229 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-206ENST00000485870 TEX13DA0A0J9YY54 714 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-206ENST00000485870 ZNF320A2RRD8 509 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 IZUMO1RA6ND01 250 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 C2orf70A6NJV1 201 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 LGALS9O00182 355 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 ATG12O94817 140 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 UCP1P25874 307 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 HSPE1P61604 102 aaKnown RBP13.97□□□□□ -0.17
COL1A1-206ENST00000485870 PRCDQ00LT1 54 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 SURF2Q15527 256 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-206ENST00000485870 FAM106AQ4KMX7 169 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 PYDC2Q56P42 97 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 SPINK9Q5DT21 86 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 Q8N402 240 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 RNASE11Q8TAA1 199 aaKnown RBP13.97□□□□□ -0.17
COL1A1-206ENST00000485870 VN1R17PQ8TDU5 208 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 THAP7Q9BT49 309 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-206ENST00000485870 C5orf66Q9H5L9 145 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 MCUBQ9NWR8 336 aa13.97□□□□□ -0.17
COL1A1-206ENST00000485870 IGHV3-35A0A0C4DH35 117 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 OR5AC1P0C628 307 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 P0C879 139 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 FOLR2P14207 255 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 S100A5P33763 92 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 PLET1Q6UQ28 207 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 OR2C3Q8N628 320 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 OR1L6Q8NGR2 347 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 NAA60Q9H7X0 242 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 PLEKHA3Q9HB20 300 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 GPR132Q9UNW8 380 aa13.96□□□□□ -0.17
COL1A1-206ENST00000485870 A0A0B4J293 547 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 A0A0G2JRQ6 117 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 OR2T8A6NH00 312 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 TGOLN2O43493 480 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 B3GALNT1O75752 331 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 FRMD6-AS1P0C7T7 363 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 NHLRC4P0CG21 123 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-206ENST00000485870 CD300EQ496F6 205 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-206ENST00000485870 Q8N1Y9 231 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 OR1P1Q8NH06 330 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 SCARB1Q8WTV0 552 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 CACNG8Q8WXS5 425 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 RRNAD1Q96FB5 475 aaKnown RBP13.95□□□□□ -0.18
COL1A1-206ENST00000485870 MISP3Q96FF7 219 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 C21orf62Q9NYP8 219 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 SCP2D1Q9UJQ7 156 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 SELENOKQ9Y6D0 94 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 V9GYH0 126 aa13.95□□□□□ -0.18
COL1A1-206ENST00000485870 CRYM-AS1A6NIL9 109 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 K7EIM0 57 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-206ENST00000485870 ST8SIA3O43173 380 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 IFNA17P01571 189 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 UNQ9165/PRO28630Q6UXU0 137 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 SLC35G3Q8N808 338 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 UBAC2Q8NBM4 344 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 OR2K2Q8NGT1 345 aa13.94□□□□□ -0.18
COL1A1-206ENST00000485870 TMEM213A2RRL7 107 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 A8MWP6 167 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 IGHV4-30-4P0DP06 118 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 CBLN1P23435 193 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 ERHP84090 104 aaKnown RBP13.93□□□□□ -0.18
COL1A1-206ENST00000485870 ZNF79Q15937 498 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 DEFB114Q30KQ6 69 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 Q56UQ5 140 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 GTSCR1Q86UQ5 136 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 SGPP2Q8IWX5 399 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 LHFPL5Q8TAF8 219 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 GLYATL2Q8WU03 294 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 TRIM63Q969Q1 353 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 PDCD10Q9BUL8 212 aa13.93□□□□□ -0.18
COL1A1-206ENST00000485870 CDS2O95674 445 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 DHODHQ02127 395 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 KLF9Q13886 244 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-206ENST00000485870 TM4SF20Q53R12 229 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 CCDC190Q86UF4 302 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 SBSPONQ8IVN8 264 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 SELENOHQ8IZQ5 122 aaKnown RBP13.92□□□□□ -0.18
COL1A1-206ENST00000485870 ZNF114Q8NC26 417 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 RBPMSQ93062 196 aaKnown RBP13.92□□□□□ -0.18
COL1A1-206ENST00000485870 BSCL2Q96G97 398 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-206ENST00000485870 PALMDQ9NP74 551 aa13.92□□□□□ -0.18
COL1A1-206ENST00000485870 TECRQ9NZ01 308 aaKnown RBP13.92□□□□□ -0.18
COL1A1-206ENST00000485870 F8W735 103 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-206ENST00000485870 FAUP35544 74 aaKnown RBP13.91□□□□□ -0.18
COL1A1-206ENST00000485870 ETV6P41212 452 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 HOXA1P49639 335 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-206ENST00000485870 AP3S2P59780 193 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 GUCA2BQ16661 112 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 TMEM268Q5VZI3 342 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 TOMM5Q8N4H5 51 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 UXS1Q8NBZ7 420 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 TMEM230Q96A57 120 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 PINX1Q96BK5 328 aaKnown RBP13.91□□□□□ -0.18
COL1A1-206ENST00000485870 SCGB3A2Q96PL1 93 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 CHRDL1Q9BU40 450 aa13.91□□□□□ -0.18
COL1A1-206ENST00000485870 ZNF436Q9C0F3 470 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms