RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PHLDA2Q53GA4 152 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 LYSMD2Q8IV50 215 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 CROCCP3Q8IVE0 287 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 OR6F1Q8NGZ6 308 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 VN1R17PQ8TDU5 208 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 BORCS5Q969J3 196 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
HMGN1-215ENST00000485550 YIPF6Q96EC8 236 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 SRSF8Q9BRL6 282 aaKnown RBP7.88□□□□□ -1.15
HMGN1-215ENST00000485550 CHRDL1Q9BU40 450 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 C20orf24Q9BUV8 137 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 GGTLC1Q9BX51 225 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 FXYD6Q9H0Q3 95 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 NDUFA4L2Q9NRX3 87 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 COMMD3Q9UBI1 195 aa7.88□□□□□ -1.15
HMGN1-215ENST00000485550 CXorf65A6NEN9 183 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 DBX1A6NMT0 343 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 GPR31O00270 319 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 CYB5BO43169 146 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 TMEM127O75204 238 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 SNAPC5O75971 98 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 EIF4EP06730 217 aaKnown RBP7.87□□□□□ -1.15
HMGN1-215ENST00000485550 NAT1P18440 290 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 HRH1P35367 487 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 TAS2R46P59540 309 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 TSPAN5P62079 268 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 Q56UQ5 140 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 SNX29P2Q8IUI4 249 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 CMTM1Q8IZ96 169 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 OR2C3Q8N628 320 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 SCARB1Q8WTV0 552 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 TMEM190Q8WZ59 177 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 LSM10Q969L4 123 aaKnown RBP7.87□□□□□ -1.15
HMGN1-215ENST00000485550 MARC2Q969Z3 335 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 OVOL2Q9BRP0 275 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 ZNF436Q9C0F3 470 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-215ENST00000485550 C21orf62Q9NYP8 219 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 ANAPC10Q9UM13 185 aa7.87□□□□□ -1.15
HMGN1-215ENST00000485550 F11RQ9Y624 299 aaKnown RBP7.87□□□□□ -1.15
HMGN1-215ENST00000485550 TRAV25A0A0B4J276 109 aa7.86□□□□□ -1.15
HMGN1-215ENST00000485550 ELLP55199 621 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-215ENST00000485550 THOC7Q6I9Y2 204 aaKnown RBP7.86□□□□□ -1.15
HMGN1-215ENST00000485550 HSD17B13Q7Z5P4 300 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-215ENST00000485550 SLC38A6Q8IZM9 456 aa7.86□□□□□ -1.15
HMGN1-215ENST00000485550 BSCL2Q96G97 398 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-215ENST00000485550 C5orf66Q9H5L9 145 aa7.86□□□□□ -1.15
HMGN1-215ENST00000485550 A0A087WXM4 84 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 IGHV3-49A0A0A0MS15 119 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 F8W735 103 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-215ENST00000485550 K7EIM0 57 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 IGHV3-48P01763 117 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 FGF2P09038 288 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 RPL35AP18077 110 aaKnown RBP7.85□□□□□ -1.15
HMGN1-215ENST00000485550 ADMP35318 185 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 VBP1P61758 197 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 NCS1P62166 190 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 RNASE12Q5GAN4 147 aaKnown RBP7.85□□□□□ -1.15
HMGN1-215ENST00000485550 LAMTOR1Q6IAA8 161 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 TBC1D26Q86UD7 250 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 GPX8Q8TED1 209 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 SLC25A46Q96AG3 418 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 MISP3Q96FF7 219 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 TMEM56Q96MV1 263 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 SPAG8Q99932 426 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-215ENST00000485550 VCX3AQ9NNX9 186 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 DAZ1Q9NQZ3 744 aaKnown RBP7.85□□□□□ -1.15
HMGN1-215ENST00000485550 PRNDQ9UKY0 176 aa7.85□□□□□ -1.15
HMGN1-215ENST00000485550 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 A0A0J9YWU9 116 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 SMIM31A0A1B0GVY4 71 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 NDUFA4O00483 81 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 TSPAN4O14817 238 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 YIF1AO95070 293 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 IGKV1-39P01597 117 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 IGKV1D-39P04432 117 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 CTSDP07339 412 aaPredicted RBP7.84□□□□□ -1.15
HMGN1-215ENST00000485550 CTSGP08311 255 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 TFPI2P48307 235 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 EWSR1Q01844 656 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGN1-215ENST00000485550 IZUMO4Q1ZYL8 232 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 DEFB135Q30KP9 77 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 SPINK9Q5DT21 86 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 SPSB3Q6PJ21 355 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 H2BFWTQ7Z2G1 175 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 OR5B3Q8NH48 314 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 OR4A16Q8NH70 328 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 FKBP11Q9NYL4 201 aa7.84□□□□□ -1.15
HMGN1-215ENST00000485550 IGHV3OR16-13A0A075B7E8 117 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 IGHV3-74A0A0B4J1X5 117 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 NUPR2A6NF83 97 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 C15orf61A6NNL5 157 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 M0QYG6 137 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 SPRY2O43597 315 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 HPGDSO60760 199 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 ELK1P19419 428 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 S100GP29377 79 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 ODF3L2Q3SX64 289 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 APRG1Q8IVJ8 170 aa7.83□□□□□ -1.16
HMGN1-215ENST00000485550 MRGPRFQ96AM1 343 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms