RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 MRGPRG-AS1Q2M3A8 158 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 UNQ5815/PRO19632Q6UWF5 114 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 OR52E5Q8NH55 327 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 OR5B12Q96R08 314 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 FAM103A1Q9BTL3 118 aaKnown RBP12.88□□□□□ -0.35
TRIM54-203ENST00000485306 PDCD10Q9BUL8 212 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 CACNG5Q9UF02 275 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 DNAH3Q8TD57 4116 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 TRAV3A0A0B4J244 114 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 SEC14L6B5MCN3 397 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 FAM90A26D6RGX4 464 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 CNIH1O95406 144 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
TRIM54-203ENST00000485306 FXYD3Q14802 87 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 TNXAQ16473 311 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 GSG1LQ6UXU4 331 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 Q6ZRM9 215 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 LFNGQ8NES3 379 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 OR1L8Q8NGR8 309 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 ARPC1AQ92747 370 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 TMEM68Q96MH6 324 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
TRIM54-203ENST00000485306 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
TRIM54-203ENST00000485306 C5orf51A6NDU8 294 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 SOX15O60248 233 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 PITX3O75364 302 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 RPL27AP46776 148 aaKnown RBP12.86□□□□□ -0.35
TRIM54-203ENST00000485306 INSL3P51460 131 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 CYCSP99999 105 aaKnown RBP12.86□□□□□ -0.35
TRIM54-203ENST00000485306 PJVKQ0ZLH3 352 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 IAH1Q2TAA2 248 aaPredicted RBP12.86□□□□□ -0.35
TRIM54-203ENST00000485306 DMRTA1Q5VZB9 504 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
TRIM54-203ENST00000485306 OR1S1Q8NH92 325 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 ASB13Q8WXK3 278 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 SLA2Q9H6Q3 261 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 NSG2Q9Y328 171 aa12.86□□□□□ -0.35
TRIM54-203ENST00000485306 C13orf42A0A1B0GVH6 325 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 GOSR2O14653 212 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 SPCS3P61009 180 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 RRAS2P62070 204 aaPredicted RBP12.85□□□□□ -0.35
TRIM54-203ENST00000485306 GNB1P62873 340 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
TRIM54-203ENST00000485306 IZUMO4Q1ZYL8 232 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
TRIM54-203ENST00000485306 GRPEL2Q8TAA5 225 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 SRSF12Q8WXF0 261 aaKnown RBP12.85□□□□□ -0.35
TRIM54-203ENST00000485306 QTRT1Q9BXR0 403 aaKnown RBP12.85□□□□□ -0.35
TRIM54-203ENST00000485306 MGAT4CQ9UBM8 478 aa12.85□□□□□ -0.35
TRIM54-203ENST00000485306 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 FAM25EA8MYX2 175 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 LINC01619G3V211 115 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 ST8SIA3O43173 380 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 LY86O95711 162 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 IFNA17P01571 189 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 TRAPPC2P0DI81 140 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 TRAPPC2BP0DI82 140 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 TPPP2P59282 170 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 OR2B8PP59922 312 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 CD69Q07108 199 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 MS4A10Q96PG2 267 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 NDUFA4L2Q9NRX3 87 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 ZNF355PQ9NSJ1 428 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
TRIM54-203ENST00000485306 INS-IGF2F8WCM5 200 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 CCSO14618 274 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 MED6O75586 246 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 LGALS1P09382 135 aaKnown RBP12.83□□□□□ -0.36
TRIM54-203ENST00000485306 ID3Q02535 119 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 FCN2Q15485 313 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 OR4D5Q8NGN0 318 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 NMES1Q9C002 83 aa12.83□□□□□ -0.36
TRIM54-203ENST00000485306 HMX3A6NHT5 357 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 MSGN1A6NI15 193 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 H3BUA1 57 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 OVOL1O14753 267 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 TRGV3P03979 118 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 HSPB1P04792 205 aaKnown RBP12.82□□□□□ -0.36
TRIM54-203ENST00000485306 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
TRIM54-203ENST00000485306 TNFRSF9Q07011 255 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 C10orf55Q5SWW7 151 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 FYTTD1Q96QD9 318 aaKnown RBP12.82□□□□□ -0.36
TRIM54-203ENST00000485306 KRTAP3-3Q9BYR6 98 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 ENY2Q9NPA8 101 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 GSKIPQ9P0R6 139 aa12.82□□□□□ -0.36
TRIM54-203ENST00000485306 A0A0G2JLM5 398 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 IGHV3-11P01762 117 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 IL15RAQ13261 267 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 ASPHD1Q5U4P2 390 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 OR5T1Q8NG75 326 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 CIB3Q96Q77 187 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms