RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SMIM10L2BP0DMW5 78 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 FAM236CP0DP71 79 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 HLA-DMBP28068 263 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 RPL28P46779 137 aaKnown RBP1.65□□□□□ -2.15
SMC4-215ENST00000484799 RPS20P60866 119 aaKnown RBP1.65□□□□□ -2.15
SMC4-215ENST00000484799 TMEM258P61165 79 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 AADACL3Q5VUY0 350 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 ZNF676Q8N7Q3 588 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 PXT1Q8NFP0 134 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 OR52L1Q8NGH7 329 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 OR51T1Q8NGJ9 327 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 PHB2Q99623 299 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 DERL1Q9BUN8 251 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 CHST6Q9GZX3 395 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 NAT8Q9UHE5 227 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 ICE1Q9Y2F5 2266 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 EIF3AQ14152 1382 aaKnown RBP1.64□□□□□ -2.15
SMC4-215ENST00000484799 COL4A2P08572 1712 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 WDR90Q96KV7 1748 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 IGLV3-9A0A075B6K5 115 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 IGHV1-18A0A0C4DH31 117 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 J3QRK9 145 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 S1PR2O95136 353 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 IGKV1-5P01602 117 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 C8GP07360 202 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 PPIBP23284 216 aaKnown RBP1.64□□□□□ -2.15
SMC4-215ENST00000484799 FXYD2P54710 66 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 NDUFA5Q16718 116 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 C12orf74Q32Q52 190 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 TMEM86AQ8N2M4 240 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 OR10X1Q8NGY0 326 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 GNPDA2Q8TDQ7 276 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 RASSF5Q8WWW0 418 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 DGCR14Q96DF8 476 aaKnown RBP1.64□□□□□ -2.15
SMC4-215ENST00000484799 CEP19Q96LK0 163 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 C2orf50Q96LR7 162 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 TXNDC17Q9BRA2 123 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 OR8D2Q9GZM6 311 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 PARVBQ9HBI1 364 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 TMEM106BQ9NUM4 274 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 TIMM22Q9Y584 194 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 ZFHX2Q9C0A1 2572 aaPredicted RBP1.64□□□□□ -2.15
SMC4-215ENST00000484799 CUL9Q8IWT3 2517 aa1.64□□□□□ -2.15
SMC4-215ENST00000484799 MPDZO75970 2070 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 PCNX2A6NKB5 2137 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 ROBO3Q96MS0 1386 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 TMSB15BA0A087X1C1 80 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 TRBV10-2A0A0K0K1G8 114 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 FAM159BA6NKW6 160 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 H3BRN7 92 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 C19orf84I3L1E1 186 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 J3QKU1 62 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 J3QQQ9 107 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 SULT1B1O43704 296 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 ZNF682O95780 498 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 EVX1P49640 407 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 RPL26P61254 145 aaKnown RBP1.63□□□□□ -2.15
SMC4-215ENST00000484799 RUNX1Q01196 453 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 SLC36A1Q7Z2H8 476 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 KTN1-AS1Q86SY8 53 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 C11orf40Q8WZ69 217 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 H1FXQ92522 213 aaKnown RBP1.63□□□□□ -2.15
SMC4-215ENST00000484799 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 TTTY12Q9BZ98 90 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 VCX3BQ9H321 246 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 C11orf68Q9H3H3 251 aaKnown RBP1.63□□□□□ -2.15
SMC4-215ENST00000484799 RNF122Q9H9V4 155 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 C14orf105Q9NVL8 296 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 ARMC1Q9NVT9 282 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 RPL26L1Q9UNX3 145 aaKnown RBP1.63□□□□□ -2.15
SMC4-215ENST00000484799 FAM32AQ9Y421 112 aaKnown RBP1.63□□□□□ -2.15
SMC4-215ENST00000484799 RTEL1-TNFRSF6BF6WH68 1400 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 TTC21AQ8NDW8 1320 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 KIAA2026Q5HYC2 2103 aa1.63□□□□□ -2.15
SMC4-215ENST00000484799 MALRD1Q5VYJ5 2156 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 MAST2Q6P0Q8 1798 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 hCG_1818297A0A087WSY0 165 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 MEIKINA0A087WXM9 373 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 RFPL4AA6NLU0 287 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 A8MT66 165 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 RFPL4AL1F8VTS6 287 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 METTL15P1P0C7V9 234 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 RPS4Y1P22090 263 aaKnown RBP1.62□□□□□ -2.15
SMC4-215ENST00000484799 G6PCP35575 357 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 ZNF80P51504 273 aaPredicted RBP1.62□□□□□ -2.15
SMC4-215ENST00000484799 MOGQ16653 247 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 DHRS4L2Q6PKH6 230 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 TMED4Q7Z7H5 227 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 C12orf45Q8N5I9 185 aaPredicted RBP1.62□□□□□ -2.15
SMC4-215ENST00000484799 Q8NDZ9 215 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 OR11H6Q8NGC7 330 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 DCANP1Q8TF63 244 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 SCGB3A1Q96QR1 104 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 ENY2Q9NPA8 101 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 C8orf4Q9NR00 106 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 OPTCQ9UBM4 332 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 PLXNA3P51805 1871 aa1.62□□□□□ -2.15
SMC4-215ENST00000484799 TOPBP1Q92547 1522 aa1.61□□□□□ -2.15
SMC4-215ENST00000484799 HECW2Q9P2P5 1572 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms