RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 NHLH2Q02577 135 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 RBMS3Q6XE24 437 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 ABHD5Q8WTS1 349 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 TNFRSF19Q9NS68 423 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 KANTRA0A1W2PQU2 76 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 SRD5A1P18405 259 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 ATP5IP56385 69 aaPredicted RBP16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 BSXQ3C1V8 233 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 TMEM86BQ8N661 226 aa16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 FAM103A1Q9BTL3 118 aaKnown RBP16.19■□□□□ 0.18
VCPKMT-203ENST00000484763 SH2D7A6NKC9 451 aaPredicted RBP16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 BCL2L11O43521 198 aa16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 SCAF4O95104 1147 aaKnown RBP16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 OR8U8P0C7N1 319 aa16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 RAB11AP62491 216 aa16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 TMEM217Q8N7C4 229 aa16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 ARPC5LQ9BPX5 153 aa16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 FBXL17Q9UF56 701 aa16.18■□□□□ 0.18
VCPKMT-203ENST00000484763 CYSRT1A8MQ03 144 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 APELAP0DMC3 54 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 RNASE2P10153 161 aaKnown RBP16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 AREGP15514 252 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 OPCMLQ14982 345 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 C2orf83Q53S99 150 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 STPG2Q8N412 459 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 TMEM170AQ8WVE7 144 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 TAAR5O14804 337 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 REG1AP05451 166 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 HBG1P69891 147 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 HBG2P69892 147 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 OR8G2PQ6IF36 304 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 ZNF114Q8NC26 417 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 OR5C1Q8NGR4 320 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 BSCL2Q96G97 398 aaPredicted RBP16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 SMIM3Q9BZL3 60 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 PARP11Q9NR21 331 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 FBXO7Q9Y3I1 522 aa16.17■□□□□ 0.18
VCPKMT-203ENST00000484763 PMS2P5A8MQ11 134 aa16.16■□□□□ 0.18
VCPKMT-203ENST00000484763 SUB1P53999 127 aaKnown RBP eCLIP16.16■□□□□ 0.18
VCPKMT-203ENST00000484763 OR1S2Q8NGQ3 325 aa16.16■□□□□ 0.18
VCPKMT-203ENST00000484763 SGMS2Q8NHU3 365 aa16.16■□□□□ 0.18
VCPKMT-203ENST00000484763 GSX1Q9H4S2 264 aaPredicted RBP16.16■□□□□ 0.18
VCPKMT-203ENST00000484763 ATP6V0E1O15342 81 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 C9orf152Q5JTZ5 239 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 ETV3LQ6ZN32 361 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 Q71RC1 249 aaPredicted RBP16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 HAPLN4Q86UW8 402 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 OR10P1Q8NGE3 313 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 P2RX4Q99571 388 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 IFNA4P05014 189 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 EGR2P11161 476 aaPredicted RBP16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 SLC38A11Q08AI6 406 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 ARL16Q0P5N6 197 aa16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 PINX1Q96BK5 328 aaKnown RBP16.15■□□□□ 0.18
VCPKMT-203ENST00000484763 MTORP42345 2549 aa16.14■□□□□ 0.17
VCPKMT-203ENST00000484763 BLCAPP62952 87 aa16.14■□□□□ 0.17
VCPKMT-203ENST00000484763 CLINT1Q14677 625 aa16.14■□□□□ 0.17
VCPKMT-203ENST00000484763 LILRB2Q8N423 598 aa16.14■□□□□ 0.17
VCPKMT-203ENST00000484763 LFNGQ8NES3 379 aa16.14■□□□□ 0.17
VCPKMT-203ENST00000484763 NPIPB5A8MRT5 1133 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 INAFM1C9JVW0 142 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 IGHG2P01859 326 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 CTRB1P17538 263 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 ASPHD1Q5U4P2 390 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 CTRB2Q6GPI1 263 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 SLC35E3Q7Z769 313 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 OR1P1Q8NH06 330 aa16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 ZNF471Q9BX82 626 aaPredicted RBP16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 F11RQ9Y624 299 aaKnown RBP16.13■□□□□ 0.17
VCPKMT-203ENST00000484763 DNAJC9-AS1A6NH13 148 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 ECSCRQ19T08 205 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 SLC51BQ86UW2 128 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 TMEM68Q96MH6 324 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 DUX5Q96PT3 197 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 ATP5SQ99766 215 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 CYTL1Q9NRR1 136 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 LINC01548A6NM66 108 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 PRSS46E5RG02 174 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 DFFBO76075 338 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 CRYGCP07315 174 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 TTC9CQ8N5M4 171 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 WFDC1Q9HC57 220 aa16.12■□□□□ 0.17
VCPKMT-203ENST00000484763 FBXO24O75426 580 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 CRIP2P52943 208 aaPredicted RBP16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 ZNF266Q14584 549 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 ATP6V1FQ16864 119 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 PVRIGQ6DKI7 326 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 UNQ5815/PRO19632Q6UWF5 114 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 C19orf35Q6ZS72 473 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 RNASEH2CQ8TDP1 164 aaKnown RBP16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 ZNF418Q8TF45 676 aaPredicted RBP16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 NPFFR1Q9GZQ6 430 aa16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 NSD1Q96L73 2696 aaPredicted RBP16.11■□□□□ 0.17
VCPKMT-203ENST00000484763 IGF1P05019 195 aa16.1■□□□□ 0.17
VCPKMT-203ENST00000484763 DEFA4P12838 97 aa16.1■□□□□ 0.17
VCPKMT-203ENST00000484763 AKIRIN2Q53H80 203 aa16.1■□□□□ 0.17
VCPKMT-203ENST00000484763 RPL7L1Q6DKI1 246 aaKnown RBP16.1■□□□□ 0.17
VCPKMT-203ENST00000484763 OR1L6Q8NGR2 347 aa16.1■□□□□ 0.17
VCPKMT-203ENST00000484763 GGACTQ9BVM4 153 aa16.1■□□□□ 0.17
VCPKMT-203ENST00000484763 WNT10AQ9GZT5 417 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms