RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GPX8Q8TED1 209 aa8.52□□□□□ -1.05
SCFD1-206ENST00000484733 CHRDL1Q9BU40 450 aa8.52□□□□□ -1.05
SCFD1-206ENST00000484733 TMEM14BQ9NUH8 114 aa8.52□□□□□ -1.05
SCFD1-206ENST00000484733 IGHV3-35A0A0C4DH35 117 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 C15orf62A8K5M9 175 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 KRASP01116 189 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 G6PCP35575 357 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 TGFBR1P36897 503 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 UCP3P55916 312 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 TNFRSF9Q07011 255 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 OR1P1Q8NH06 330 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 TXN2Q99757 166 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 HYDINQ4G0P3 5121 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 SPRY2O43597 315 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 BMI1P35226 326 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 ADMP35318 185 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 TSPAN14Q8NG11 270 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 ZNF414Q96IQ9 312 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 SCPEP1Q9HB40 452 aa8.51□□□□□ -1.05
SCFD1-206ENST00000484733 OR4C46A6NHA9 309 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 CTSGP08311 255 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 S100GP29377 79 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-206ENST00000484733 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 ZNF114Q8NC26 417 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 SLC25A46Q96AG3 418 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 SMPXQ9UHP9 88 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 NSG2Q9Y328 171 aa8.5□□□□□ -1.05
SCFD1-206ENST00000484733 A0A087WXM4 84 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 HRH1P35367 487 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 RELQ04864 619 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-206ENST00000484733 Q56UQ5 140 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 RNF183Q96D59 192 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 GALNT14Q96FL9 552 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 SEC22AQ96IW7 307 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 I3L2K1 104 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 APOA1P02647 267 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 CTSDP07339 412 aaPredicted RBP8.49□□□□□ -1.05
SCFD1-206ENST00000484733 OR10C1Q96KK4 312 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 VCX3AQ9NNX9 186 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 UBQLN2Q9UHD9 624 aa8.49□□□□□ -1.05
SCFD1-206ENST00000484733 IGHV3-21A0A0B4J1V1 117 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 IGHV7-4-1A0A0J9YVY3 117 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 NUPR2A6NF83 97 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 DBX1A6NMT0 343 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 EIF4EP06730 217 aaKnown RBP8.48□□□□□ -1.05
SCFD1-206ENST00000484733 RCVRNP35243 200 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 MFAP4P55083 255 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 STPG3Q8N7X2 389 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 A0A0J9YWU9 116 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 SMIM31A0A1B0GVY4 71 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 CHEK1O14757 476 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 IGKV1-39P01597 117 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 IGKV1D-39P04432 117 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 TSPAN5P62079 268 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 PRCDQ00LT1 54 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 PHLDA2Q53GA4 152 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 TBC1D26Q86UD7 250 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 C20orf24Q9BUV8 137 aa8.48□□□□□ -1.05
SCFD1-206ENST00000484733 NUPL2O15504 423 aaKnown RBP8.47□□□□□ -1.05
SCFD1-206ENST00000484733 RND3P61587 244 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 HSPE1P61604 102 aaKnown RBP8.47□□□□□ -1.05
SCFD1-206ENST00000484733 LSM3P62310 102 aaKnown RBP8.47□□□□□ -1.05
SCFD1-206ENST00000484733 CEMP1Q6PRD7 247 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-206ENST00000484733 H2BFWTQ7Z2G1 175 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 UBAC2Q8NBM4 344 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 TMEM116Q8NCL8 245 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 OR4A16Q8NH70 328 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 NXF2Q9GZY0 626 aaKnown RBP8.47□□□□□ -1.05
SCFD1-206ENST00000484733 MAP6D1Q9H9H5 199 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 INS-IGF2F8WCM5 200 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 CD5P06127 495 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 FAM90A2PQ658T7 463 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 RHPN1-AS1Q9BWJ2 59 aa8.47□□□□□ -1.05
SCFD1-206ENST00000484733 C6orf62Q9GZU0 229 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-206ENST00000484733 ZNF207O43670 478 aaKnown RBP8.46□□□□□ -1.05
SCFD1-206ENST00000484733 TNFAIP8O95379 198 aa8.46□□□□□ -1.05
SCFD1-206ENST00000484733 ERHP84090 104 aaKnown RBP8.46□□□□□ -1.05
SCFD1-206ENST00000484733 DEFB135Q30KP9 77 aa8.46□□□□□ -1.05
SCFD1-206ENST00000484733 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.05
SCFD1-206ENST00000484733 MISP3Q96FF7 219 aa8.46□□□□□ -1.05
SCFD1-206ENST00000484733 ZNF486Q96H40 463 aaPredicted RBP8.46□□□□□ -1.05
SCFD1-206ENST00000484733 RNF2Q99496 336 aa8.46□□□□□ -1.05
SCFD1-206ENST00000484733 COMMD3Q9UBI1 195 aa8.46□□□□□ -1.05
SCFD1-206ENST00000484733 CXorf65A6NEN9 183 aa8.46□□□□□ -1.06
SCFD1-206ENST00000484733 MT-CO2P00403 227 aa8.46□□□□□ -1.06
SCFD1-206ENST00000484733 EWSR1Q01844 656 aaKnown RBP eCLIP8.46□□□□□ -1.06
SCFD1-206ENST00000484733 TRAV14DV4A0A0A6YYC5 116 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 GATAD1Q8WUU5 269 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
SCFD1-206ENST00000484733 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 P0C879 139 aa8.45□□□□□ -1.06
SCFD1-206ENST00000484733 RPL35AP18077 110 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms