RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 JOSD2Q8TAC2 188 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 KRTAP2-4Q9BYR9 128 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 KIF15Q9NS87 1388 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 SPTBN2O15020 2390 aa0.01□□□□□ -2.41
CCDC66-219ENST00000484441 TEX15Q9BXT5 2789 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 C21orf140B9A014 251 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 SMLR1H3BR10 107 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 M0R2N4 97 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 OR2T1O43869 369 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 ADGRB2O60241 1585 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 FGF6P10767 208 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 CD151P48509 253 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 RAB13P51153 203 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 SUPT4H1P63272 117 aaKnown RBP0□□□□□ -2.41
CCDC66-219ENST00000484441 FAT1Q14517 4588 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 C1orf194Q5T5A4 169 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 TMEM251Q8N6I4 163 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 ZNF75CPQ92670 426 aaPredicted RBP0□□□□□ -2.41
CCDC66-219ENST00000484441 CEP250Q9BV73 2442 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 KRTAP2-1Q9BYU5 128 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 DERL2Q9GZP9 239 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 CXorf21Q9HAI6 301 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 CFAP45Q9UL16 551 aa0□□□□□ -2.41
CCDC66-219ENST00000484441 NBPF19A0A087WUL8 3843 aa-0□□□□□ -2.41
CCDC66-219ENST00000484441 WDFY4Q6ZS81 3184 aa-0□□□□□ -2.41
CCDC66-219ENST00000484441 PKD1L1Q8TDX9 2849 aa-0□□□□□ -2.41
CCDC66-219ENST00000484441 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 MYO7AQ13402 2215 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 DNAH7Q8WXX0 4024 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 COL12A1Q99715 3063 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 MXRA5Q9NR99 2828 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 IGHV1-69-2A0A0G2JMI3 117 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 TINCRA0A1B0GVN0 87 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 I3L521 148 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 S100A7P31151 101 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 ZNF93P35789 620 aaPredicted RBP-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 OR4D2P58180 307 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 MGAT3Q09327 533 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 FAM78BQ5VT40 261 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 ZNF550Q7Z398 422 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 CD302Q8IX05 232 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 C10orf67Q8IYJ2 551 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 Q8N814 137 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 ZNF418Q8TF45 676 aaPredicted RBP-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 C11orf40Q8WZ69 217 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 CHMP5Q9NZZ3 219 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 FAM186AA6NE01 2351 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 MYCBP2O75592 4640 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 CHD9Q3L8U1 2897 aa-0.01□□□□□ -2.41
CCDC66-219ENST00000484441 SPTAN1Q13813 2472 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 ABCA4P78363 2273 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 WNK2Q9Y3S1 2297 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 PRKDCP78527 4128 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 TTC21AQ8NDW8 1320 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 YEATS4O95619 227 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 CCL1P22362 96 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 RPL18Q07020 188 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 C5orf46Q6UWT4 87 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 ZNF826PQ6ZT77 177 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 EEF1AKMT1Q8WVE0 214 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 TNXBP22105 4242 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 LRP1Q07954 4544 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 PLECQ15149 4684 aaKnown RBP-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 A0A0C4DFX4 3053 aa-0.02□□□□□ -2.41
CCDC66-219ENST00000484441 SPTA1P02549 2419 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 MAP1AP78559 2803 aaPredicted RBP-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 FUOMA2VDF0 154 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 HLA-DRAP01903 254 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 PMS2P3Q13401 168 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 SDHAF4Q5VUM1 108 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 SYPL2Q5VXT5 272 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 OR5B17Q8NGF7 314 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 AMELYQ99218 206 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 FUT9Q9Y231 359 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 LAMA3Q16787 3333 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 NBASA2RRP1 2371 aa-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 LAMA2P24043 3122 aaKnown RBP-0.03□□□□□ -2.41
CCDC66-219ENST00000484441 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 MAST2Q6P0Q8 1798 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 F8P00451 2351 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 DYNC1H1Q14204 4646 aaKnown RBP-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 TACC2O95359 2948 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 WDR87Q6ZQQ6 2873 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 HRNRQ86YZ3 2850 aaPredicted RBP-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 C1orf232A0A0U1RR37 186 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 YKT6O15498 198 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 TPM1P09493 284 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 SRSF6Q13247 344 aaKnown RBP-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 GDF5OSQ5U4N7 250 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 LCN15Q6UWW0 184 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 WDR54Q9H977 334 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 SPANXB1Q9NS25 103 aaPredicted RBP-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 TNRC18O15417 2968 aaPredicted RBP-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 PDE4DIPQ5VU43 2346 aa-0.04□□□□□ -2.42
CCDC66-219ENST00000484441 NIPBLQ6KC79 2804 aaeCLIP-0.05□□□□□ -2.42
CCDC66-219ENST00000484441 LYSTQ99698 3801 aa-0.05□□□□□ -2.42
CCDC66-219ENST00000484441 CENPEQ02224 2701 aa-0.05□□□□□ -2.42
CCDC66-219ENST00000484441 CCDC88AQ3V6T2 1871 aa-0.05□□□□□ -2.42
CCDC66-219ENST00000484441 OR4C45A6NMZ5 311 aa-0.05□□□□□ -2.42
CCDC66-219ENST00000484441 GOLGA6L19H0YKK7 550 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms