RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 IGKV1D-43A0A0B4J1Z2 117 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 TMEM189A5PLL7 270 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 A8MUU9 505 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 H3BQ85 93 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 UBFD1O14562 309 aaKnown RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 NDUFA2O43678 99 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF73O43830 326 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 CST8O60676 142 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 LY6HO94772 140 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 NPYP01303 97 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 IGHV1-69P01742 117 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 IGHV3-53P01767 116 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 COX4I1P13073 169 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 MDKP21741 143 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 POLR2HP52434 150 aaKnown RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 YPEL3P61236 119 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 BIKQ13323 160 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 RRN3P1Q2M238 152 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF322Q6U7Q0 402 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 CNEP1R1Q8N9A8 125 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 OR8J3Q8NGG0 315 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 KLF14Q8TD94 323 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 TPT1P8Q9HAU6 139 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 PCTPQ9UKL6 214 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 WDR7Q9Y4E6 1490 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 DICER1Q9UPY3 1922 aaKnown RBP2.81□□□□□ -1.96
PTCD3-214ENST00000483925 A0A087WX48 190 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 IRGMA1A4Y4 181 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 C7orf66A4D0T2 115 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 FABP5P3A8MUU1 101 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 TRAPPC2LH3BP13 241 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 LEPROTO15243 131 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 CYB5BO43169 146 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 BCL2P10415 239 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 MUC1P15941 1255 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-214ENST00000483925 SDC4P31431 198 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 CCR2P41597 374 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 RPL18Q07020 188 aaKnown RBP2.8□□□□□ -1.96
PTCD3-214ENST00000483925 C2orf83Q53S99 150 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 TMEM69Q5SWH9 247 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 BCL2L15Q5TBC7 163 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 DNAJC9Q8WXX5 260 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 SEC22CQ9BRL7 303 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 TP73-AS1Q9UF72 201 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF835Q9Y2P0 537 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 NOTCH2Q04721 2471 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 GTF3C1Q12789 2109 aa2.8□□□□□ -1.96
PTCD3-214ENST00000483925 YLPM1P49750 1951 aaKnown RBP2.8□□□□□ -1.96
PTCD3-214ENST00000483925 HECW1Q76N89 1606 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 BCL9O00512 1426 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 IGKV6D-41A0A0C4DH26 115 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 GGT3PA6NGU5 568 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF98A6NK75 572 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 RFPL4AA6NLU0 287 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 RFPL4AL1F8VTS6 287 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 C19orf84I3L1E1 186 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 GGCTO75223 188 aaKnown RBP2.79□□□□□ -1.96
PTCD3-214ENST00000483925 SULT1C4O75897 302 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 CDS2O95674 445 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 RPL7P18124 248 aaKnown RBP2.79□□□□□ -1.96
PTCD3-214ENST00000483925 SRIP30626 198 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF80P51504 273 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-214ENST00000483925 PSG9Q00887 426 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 MEF2BQ02080 365 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-214ENST00000483925 PLCXD2Q0VAA5 305 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 FKBP1CQ5VVH2 108 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 IFT20Q8IY31 132 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 OR51T1Q8NGJ9 327 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 CLDND2Q8NHS1 167 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 MUC7Q8TAX7 377 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 SLAMF6Q96DU3 332 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 MIEN1Q9BRT3 115 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 MED31Q9Y3C7 131 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 KIF1BO60333 1816 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 ADAMTSL1Q8N6G6 1762 aa2.79□□□□□ -1.96
PTCD3-214ENST00000483925 CAMSAP2Q08AD1 1489 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TECPR2O15040 1411 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 SOGA1O94964 1423 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 KIAA1671Q9BY89 1806 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 IGHV3-73A0A0B4J1V6 119 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TRDV1A0A1B0GX56 115 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TLCD2A6NGC4 264 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 BUB1B-PAK6H3BSN5 160 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TXNDC9O14530 226 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TAX1BP3O14907 124 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TRGC2P03986 189 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 S100A1P23297 94 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 RPS3P23396 243 aaKnown RBP eCLIP2.78□□□□□ -1.96
PTCD3-214ENST00000483925 NFYBP25208 207 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 CA5AP35218 305 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 SRP14P37108 136 aaKnown RBP2.78□□□□□ -1.96
PTCD3-214ENST00000483925 MIAQ16674 131 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 RTL8BQ17RB0 113 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 LGALSLQ3ZCW2 172 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-214ENST00000483925 RPL13AP3Q6NVV1 102 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF767PQ75MW2 155 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 TMEM229BQ8NBD8 167 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
PTCD3-214ENST00000483925 CANT1Q8WVQ1 401 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms