RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 PROK1P58294 105 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 CFHR3Q02985 330 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 C11orf87Q6NUJ2 197 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 C10orf99Q6UWK7 81 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 OR5AU1Q8NGC0 362 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 CIB3Q96Q77 187 aaPredicted RBP9.58□□□□□ -0.88
SDC1-206ENST00000482879 ZFP57Q9NU63 452 aa9.58□□□□□ -0.88
SDC1-206ENST00000482879 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
SDC1-206ENST00000482879 LY86O95711 162 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 IFNA10P01566 189 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 IGHG4P01861 327 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 PRH1P02810 166 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 RLN2P04090 185 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 GIPP09681 153 aaPredicted RBP9.57□□□□□ -0.88
SDC1-206ENST00000482879 PF4V1P10720 104 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 SUB1P53999 127 aaKnown RBP eCLIP9.57□□□□□ -0.88
SDC1-206ENST00000482879 LRRC37A5PQ49AS3 106 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 AWAT1Q58HT5 328 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 SLC25A24Q6NUK1 477 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 TEX38Q6PEX7 206 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 CHAC2Q8WUX2 184 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 PPP1R1CQ8WVI7 109 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 ASB13Q8WXK3 278 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 MS4A10Q96PG2 267 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 RAB40CQ96S21 281 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 P2RX4Q99571 388 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 F11RQ9Y624 299 aaKnown RBP9.57□□□□□ -0.88
SDC1-206ENST00000482879 U3KQ87 197 aa9.57□□□□□ -0.88
SDC1-206ENST00000482879 L7N2F9 121 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 CYB5BO43169 146 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 ELANEP08246 267 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 RNASE2P10153 161 aaKnown RBP9.56□□□□□ -0.88
SDC1-206ENST00000482879 PVALBP20472 110 aaPredicted RBP9.56□□□□□ -0.88
SDC1-206ENST00000482879 HTR2BP41595 481 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 BCAP31P51572 246 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 RIPPLY3P57055 190 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 RAP2BP61225 183 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 VAMP2P63027 116 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 CD83Q01151 205 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 FOXE3Q13461 319 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 TMEM65Q6PI78 240 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 LCNL1Q6ZST4 164 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 COMMD1Q8N668 190 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 SLC24A4Q8NFF2 622 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 OR1L6Q8NGR2 347 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 WIPF2Q8TF74 440 aaPredicted RBP9.56□□□□□ -0.88
SDC1-206ENST00000482879 SMIM8Q96KF7 97 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 KLK15Q9H2R5 256 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 PSENENQ9NZ42 101 aa9.56□□□□□ -0.88
SDC1-206ENST00000482879 H3BUA1 57 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 MPC2O95563 127 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 TMEM50AO95807 157 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 TRGV3P03979 118 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 HIST1H1BP16401 226 aaKnown RBP9.55□□□□□ -0.88
SDC1-206ENST00000482879 NPY1RP25929 384 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 PSMB8P28062 276 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 RAB9AP51151 201 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 MFAP2P55001 183 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 PAX9P55771 341 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 TPPP2P59282 170 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 RPL23AP62750 156 aaKnown RBP9.55□□□□□ -0.88
SDC1-206ENST00000482879 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
SDC1-206ENST00000482879 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 C2orf83Q53S99 150 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 SPANXN5Q5MJ07 72 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 NOXA1Q86UR1 476 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 OR4X2Q8NGF9 303 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 FANCD2OSQ96PS1 177 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 FBXL7Q9UJT9 491 aa9.55□□□□□ -0.88
SDC1-206ENST00000482879 PAIP2BQ9ULR5 123 aaKnown RBP9.55□□□□□ -0.88
SDC1-206ENST00000482879 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
SDC1-206ENST00000482879 IGLV11-55A0A075B6I3 123 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 H0YIZ8 118 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 H3BP45 60 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 DEDDO75618 318 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 OR2J3O76001 311 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 BRI3O95415 125 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
SDC1-206ENST00000482879 PET100P0DJ07 73 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 CD28P10747 220 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 ATP5IP56385 69 aaPredicted RBP9.54□□□□□ -0.88
SDC1-206ENST00000482879 TAS2R30P59541 319 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 RHOGP84095 191 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 FGL1Q08830 312 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 C11orf44Q8N8P7 122 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 OR2T35Q8NGX2 323 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 MISP3Q96FF7 219 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 OR4C12Q96R67 309 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 RNF126Q9BV68 326 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 C11orf1Q9H5F2 150 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 SLA2Q9H6Q3 261 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 RANGRFQ9HD47 186 aaPredicted RBP9.54□□□□□ -0.88
SDC1-206ENST00000482879 OR5AC2Q9NZP5 309 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 THYN1Q9P016 225 aa9.54□□□□□ -0.88
SDC1-206ENST00000482879 DMRT1Q9Y5R6 373 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms