RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 HOXD3P31249 432 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 MECP2P51608 486 aaKnown RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 UBE2MP61081 183 aaKnown RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 EXOSC2Q13868 293 aaKnown RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 KLF5Q13887 457 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 TMEM187Q14656 261 aa12.57□□□□□ -0.4
CCDC78-212ENST00000482152 LGI3Q8N145 548 aa12.57□□□□□ -0.4
CCDC78-212ENST00000482152 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
CCDC78-212ENST00000482152 ATP6V0BQ99437 205 aa12.57□□□□□ -0.4
CCDC78-212ENST00000482152 CCDC32Q9BV29 185 aa12.57□□□□□ -0.4
CCDC78-212ENST00000482152 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
CCDC78-212ENST00000482152 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 F11RQ9Y624 299 aaKnown RBP12.57□□□□□ -0.4
CCDC78-212ENST00000482152 MEGF8Q7Z7M0 2845 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 DBX1A6NMT0 343 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 NDUFB8O95169 186 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 SLURP1P55000 103 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 AARDQ4LEZ3 155 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 TMEM268Q5VZI3 342 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 OR1P1Q8NH06 330 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 OR52E5Q8NH55 327 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 PLEKHA3Q9HB20 300 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
CCDC78-212ENST00000482152 A0A0B4J2A0 478 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 DUXBA0A1W2PPF3 345 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 IFNA17P01571 189 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 SUPT4H1P63272 117 aaKnown RBP12.55□□□□□ -0.4
CCDC78-212ENST00000482152 RPEL1Q2QD12 228 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 SLC25A24Q6NUK1 477 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 ACSM6Q6P461 480 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 TMED4Q7Z7H5 227 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 CENPSQ8N2Z9 138 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 OR2C3Q8N628 320 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 ZNF114Q8NC26 417 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 LHFPL5Q8TAF8 219 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 SHPKQ9UHJ6 478 aa12.55□□□□□ -0.4
CCDC78-212ENST00000482152 ST8SIA3O43173 380 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 GGCTO75223 188 aaKnown RBP12.54□□□□□ -0.4
CCDC78-212ENST00000482152 NDUFB6O95139 128 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 SUB1P53999 127 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC78-212ENST00000482152 SPCS3P61009 180 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 PDLIM3Q53GG5 364 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-212ENST00000482152 SLC35G3Q8N808 338 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 LRTM2Q8N967 370 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 OR4C12Q96R67 309 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 ENY2Q9NPA8 101 aa12.54□□□□□ -0.4
CCDC78-212ENST00000482152 SNCAP37840 140 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 CCR6P51684 374 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 DEFA5Q01523 94 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 IZUMO4Q1ZYL8 232 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 C19orf35Q6ZS72 473 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 GPR146Q96CH1 333 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 GAR1Q9NY12 217 aaKnown RBP12.53□□□□□ -0.4
CCDC78-212ENST00000482152 SIGLEC8Q9NYZ4 499 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
CCDC78-212ENST00000482152 A0A0G2JRQ6 117 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 BMPR1BO00238 502 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 SFT2D2O95562 160 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 TRBV12-3P01733 135 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 CLEC3BP05452 202 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 SULT1A3P0DMM9 295 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 SULT1A4P0DMN0 295 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 VAMP1P23763 118 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 Q6ZRM9 215 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 GPHB5Q86YW7 130 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 OR9G4Q8NGQ1 327 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 ZNF502Q8TBZ5 544 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
CCDC78-212ENST00000482152 DMRT1Q9Y5R6 373 aa12.52□□□□□ -0.41
CCDC78-212ENST00000482152 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 A0A1B0GU03 582 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 LGALS9O00182 355 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 CORTO00230 105 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 SAP30O75446 220 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 ARL3P36405 182 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 SYNJ2BPP57105 145 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 DCTN2Q13561 401 aaKnown RBP12.51□□□□□ -0.41
CCDC78-212ENST00000482152 FAM106AQ4KMX7 169 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 SPSB3Q6PJ21 355 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 CLEC19AQ6UXS0 136 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 CCDC140Q96MF4 163 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 TXN2Q99757 166 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 AURKAIP1Q9NWT8 199 aaPredicted RBP12.51□□□□□ -0.41
CCDC78-212ENST00000482152 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 NOTCH3Q9UM47 2321 aa12.51□□□□□ -0.41
CCDC78-212ENST00000482152 LINC00854A0A1B0GVQ3 168 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 PLA2G10O15496 165 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 LYRM1O43325 122 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 SLC25A6P12236 298 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 HOXA1P49639 335 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-212ENST00000482152 MFAP2P55001 183 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 ZNF846Q147U1 533 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 SMCO1Q147U7 214 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 NMSQ5H8A3 153 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 BSCL2Q96G97 398 aaPredicted RBP12.5□□□□□ -0.41
CCDC78-212ENST00000482152 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
CCDC78-212ENST00000482152 MFSD2BA6NFX1 497 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms