RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 EBF4Q9BQW3 602 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 PRNDQ9UKY0 176 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.3□□□□□ -2.04
SMC6-208ENST00000481708 DIDO1Q9BTC0 2240 aaKnown RBP2.3□□□□□ -2.04
SMC6-208ENST00000481708 RP1P56715 2156 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 ITPR2Q14571 2701 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 VPS37CA5D8V6 355 aaPredicted RBP2.3□□□□□ -2.04
SMC6-208ENST00000481708 TSPAN19P0C672 248 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 CRYGSP22914 178 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 ARPP19P56211 112 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 SMCO1Q147U7 214 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 HES5Q5TA89 166 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 GRINAQ7Z429 371 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 HSD17B13Q7Z5P4 300 aaPredicted RBP2.3□□□□□ -2.04
SMC6-208ENST00000481708 ZNF584Q8IVC4 421 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 LINC01555Q8NAE3 123 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 LINC01006Q8NI28 216 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 OR2A5Q96R48 311 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 JPT1Q9UK76 154 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 ANGPT4Q9Y264 503 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 FLVCR1Q9Y5Y0 555 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 HEATR5BQ9P2D3 2071 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 A0A087WYN8 130 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 OR2B3O76000 313 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 OR2A4O95047 310 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 IGLV2-11P01706 119 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 CGB3P0DN86 165 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 CGB7P0DN87 165 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 RAB3AP20336 220 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 AGTR1P30556 359 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 RHOBP62745 196 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 GLYATQ6IB77 296 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 NANOGP8Q6NSW7 305 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 OR10G6Q8NH81 332 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 CCL4L1Q8NHW4 92 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 ZNF420Q8TAQ5 688 aaPredicted RBP2.3□□□□□ -2.04
SMC6-208ENST00000481708 NAT14Q8WUY8 206 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 CYGBQ8WWM9 190 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 DCUN1D4Q92564 292 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 TMBIM1Q969X1 311 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 OR2A7Q96R45 310 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 F2RL3Q96RI0 385 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 CMSS1Q9BQ75 279 aaKnown RBP2.3□□□□□ -2.04
SMC6-208ENST00000481708 NANOGQ9H9S0 305 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 ANAPC10Q9UM13 185 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 POMPQ9Y244 141 aa2.3□□□□□ -2.04
SMC6-208ENST00000481708 RTTNQ86VV8 2226 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 LOC102724200A0A096LPH7 203 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 TCAPO15273 167 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 PGLYRP1O75594 196 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 BGLAPP02818 100 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 CSN2P05814 226 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 CECR9P0C854 216 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 P0C879 139 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 ZNF823P16415 610 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 RPL7P18124 248 aaKnown RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 H2BFSP57053 126 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 VSX2P58304 361 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 AKAP6Q13023 2319 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 SPA17Q15506 151 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 KLHL30-AS1Q8NEE0 82 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 ZNF555Q8NEP9 628 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 OR11G2Q8NGC1 345 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 OR4K5Q8NGD3 323 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 SLC25A44Q96H78 314 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 ERMAPQ96PL5 475 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 FGF23Q9GZV9 251 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 ALX4Q9H161 411 aaPredicted RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 PROCRQ9UNN8 238 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 LSM5Q9Y4Y9 91 aaKnown RBP2.29□□□□□ -2.04
SMC6-208ENST00000481708 DSPPQ9NZW4 1301 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 IGHV2-26A0A0B4J1V2 119 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 hADV38S2A0JD32 116 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 SUPT7LO94864 414 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 FBP1P09467 338 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 OR13C7P0DN81 318 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 CPMP14384 443 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 MARCKSL1P49006 195 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 TEX30Q5JUR7 227 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 AVPI1Q5T686 147 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 C5orf46Q6UWT4 87 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 LY6G5BQ8NDX9 201 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 OR8B12Q8NGG6 310 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 OR51A2Q8NGJ7 313 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 MFSD8Q8NHS3 518 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 CD200R1Q8TD46 325 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 DCAKDQ8WVC6 231 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 ACY3Q96HD9 319 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 SLC35E1Q96K37 410 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 TP73-AS1Q9UF72 201 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 NUBP2Q9Y5Y2 271 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 ZANQ9Y493 2812 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 TRAV26-2A0A0B4J265 109 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 PQLC2LA1A4F0 135 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 GMNCA6NCL1 334 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 TCF21O43680 179 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 MMP23AO75900 390 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 LY6G6DO95868 133 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 OR4A8P0C604 315 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms