RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 DDTP30046 118 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 UBE2G2P60604 165 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 OR7G1Q8NGA0 311 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 OR2T27Q8NH04 317 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 SGMS2Q8NHU3 365 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 HAVCR2Q8TDQ0 301 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 PTPRMP28827 1452 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 BCL9LQ86UU0 1499 aa0.77□□□□□ -2.29
CALD1-219ENST00000480638 CDK12Q9NYV4 1490 aaPredicted RBP0.77□□□□□ -2.29
CALD1-219ENST00000480638 CICQ96RK0 1608 aaPredicted RBP0.77□□□□□ -2.29
CALD1-219ENST00000480638 KDM5AP29375 1690 aaKnown RBP0.77□□□□□ -2.29
CALD1-219ENST00000480638 CHD9Q3L8U1 2897 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 FAM186AA6NE01 2351 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 NCOA6Q14686 2063 aaPredicted RBP0.76□□□□□ -2.29
CALD1-219ENST00000480638 LRRC7Q96NW7 1537 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 SETD5Q9C0A6 1442 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 TONSLQ96HA7 1378 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 FABP12A6NFH5 140 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 CETN3O15182 167 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 CALUO43852 315 aaPredicted RBP0.76□□□□□ -2.29
CALD1-219ENST00000480638 MSMBP08118 114 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 REG1BP48304 166 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 CXCR4P61073 352 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 SKP1P63208 163 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 IQCF2Q8IXL9 164 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 FAM19A2Q8N3H0 131 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 UBL4BQ8N7F7 174 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 NDEL1Q9GZM8 345 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 WDR54Q9H977 334 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 SPANXB1Q9NS25 103 aaPredicted RBP0.76□□□□□ -2.29
CALD1-219ENST00000480638 IMP3Q9NV31 184 aaKnown RBP0.76□□□□□ -2.29
CALD1-219ENST00000480638 C15orf41Q9Y2V0 281 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 SNURFQ9Y675 71 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 DCHS2Q6V1P9 2916 aa0.76□□□□□ -2.29
CALD1-219ENST00000480638 HMCN2Q8NDA2 5059 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 DMBT1Q9UGM3 2413 aaPredicted RBP0.75□□□□□ -2.29
CALD1-219ENST00000480638 ITGB1BP1O14713 200 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 LEPROTO15243 131 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 COCHO43405 550 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 C10orf55Q5SWW7 151 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.75□□□□□ -2.29
CALD1-219ENST00000480638 DHFR2Q86XF0 187 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 GID4Q8IVV7 300 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 ZNF676Q8N7Q3 588 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 CHMP4BQ9H444 224 aaKnown RBP0.75□□□□□ -2.29
CALD1-219ENST00000480638 COQ4Q9Y3A0 265 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 WNK1Q9H4A3 2382 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 CFAP43Q8NDM7 1665 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 COL7A1Q02388 2944 aa0.75□□□□□ -2.29
CALD1-219ENST00000480638 SYNJ1O43426 1573 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 TOPBP1Q92547 1522 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 ATMQ13315 3056 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 KIF24Q5T7B8 1368 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 RAD50Q92878 1312 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 KIF13AQ9H1H9 1805 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 GOLGA6L10A6NI86 522 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 SDCBPO00560 298 aaPredicted RBP0.74□□□□□ -2.29
CALD1-219ENST00000480638 HPGDSO60760 199 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 UBBP0CG47 229 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 SSX8Q7RTT4 187 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 FUNDC1Q8IVP5 155 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 FAM9CQ8IZT9 166 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 TBC1D19Q8N5T2 526 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 EEF1AKMT1Q8WVE0 214 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 DNAJB3Q8WWF6 145 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 C7orf50Q9BRJ6 194 aaKnown RBP0.74□□□□□ -2.29
CALD1-219ENST00000480638 CXorf21Q9HAI6 301 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 GPR84Q9NQS5 396 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 NOSIPQ9Y314 301 aaKnown RBP0.74□□□□□ -2.29
CALD1-219ENST00000480638 ATP6V1DQ9Y5K8 247 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 GLI3P10071 1580 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 THOC2Q8NI27 1593 aaKnown RBP0.74□□□□□ -2.29
CALD1-219ENST00000480638 CLASP1Q7Z460 1538 aa0.74□□□□□ -2.29
CALD1-219ENST00000480638 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 TRBV10-2A0A0K0K1G8 114 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 C1orf232A0A0U1RR37 186 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 GEMIN2O14893 280 aaKnown RBP0.73□□□□□ -2.29
CALD1-219ENST00000480638 YEATS4O95619 227 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 UGT2B7P16662 529 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 HAAOP46952 286 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 CSN1S1P47710 185 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 TNFAIP8L3Q5GJ75 292 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 CDKL4Q5MAI5 379 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 C1orf194Q5T5A4 169 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 SLC22A24Q8N4F4 322 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 TMEM156Q8N614 296 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 DDI1Q8WTU0 396 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 SMIM19Q96E16 107 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 ERMAPQ96PL5 475 aaPredicted RBP0.73□□□□□ -2.29
CALD1-219ENST00000480638 OR8D2Q9GZM6 311 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 ANAPC10Q9UM13 185 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 SHANK2Q9UPX8 1470 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 TRIOO75962 3097 aa0.73□□□□□ -2.29
CALD1-219ENST00000480638 HEATR5AQ86XA9 2040 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 KIF15Q9NS87 1388 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 PPRC1Q5VV67 1664 aaKnown RBP0.72□□□□□ -2.29
CALD1-219ENST00000480638 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 SVEP1Q4LDE5 3571 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 ACANP16112 2415 aa0.72□□□□□ -2.29
CALD1-219ENST00000480638 F5H768 121 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms