RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
UPF3A-206ENST00000480362 PARP11Q9NR21 331 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 FBXO7Q9Y3I1 522 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 CELSR1Q9NYQ6 3014 aa13.88□□□□□ -0.19
UPF3A-206ENST00000480362 CST7O76096 145 aa13.88□□□□□ -0.19
UPF3A-206ENST00000480362 RNASE2P10153 161 aaKnown RBP13.88□□□□□ -0.19
UPF3A-206ENST00000480362 NPY1RP25929 384 aa13.88□□□□□ -0.19
UPF3A-206ENST00000480362 HTR2BP41595 481 aa13.88□□□□□ -0.19
UPF3A-206ENST00000480362 SULT1A1P50225 295 aa13.88□□□□□ -0.19
UPF3A-206ENST00000480362 ZNF345Q14585 488 aa13.88□□□□□ -0.19
UPF3A-206ENST00000480362 BSCL2Q96G97 398 aaPredicted RBP13.88□□□□□ -0.19
UPF3A-206ENST00000480362 DNAJC9-AS1A6NH13 148 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 ATP6V0E1O15342 81 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 OR8U8P0C7N1 319 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 RAB11AP62491 216 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 BSXQ3C1V8 233 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 C2orf83Q53S99 150 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 ASPHD1Q5U4P2 390 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 Q6ZS46 218 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 STX12Q86Y82 276 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 LFNGQ8NES3 379 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 SGMS2Q8NHU3 365 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 ZNF418Q8TF45 676 aaPredicted RBP13.87□□□□□ -0.19
UPF3A-206ENST00000480362 TMEM170AQ8WVE7 144 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 ARL6Q9H0F7 186 aa13.87□□□□□ -0.19
UPF3A-206ENST00000480362 PMS2P5A8MQ11 134 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 IGHG2P01859 326 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 S100A11P31949 105 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 SUB1P53999 127 aaKnown RBP eCLIP13.86□□□□□ -0.19
UPF3A-206ENST00000480362 ATP5IP56385 69 aaPredicted RBP13.86□□□□□ -0.19
UPF3A-206ENST00000480362 ARL16Q0P5N6 197 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 ETV3LQ6ZN32 361 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 SLC35E3Q7Z769 313 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 HAPLN4Q86UW8 402 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 TMEM217Q8N7C4 229 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 P2RX4Q99571 388 aa13.86□□□□□ -0.19
UPF3A-206ENST00000480362 NAV3Q8IVL0 2385 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 IFNA4P05014 189 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 BAXQ07812 192 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 OPCMLQ14982 345 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 UNQ5815/PRO19632Q6UWF5 114 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 C19orf35Q6ZS72 473 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 SMIM3Q9BZL3 60 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 ESM1Q9NQ30 184 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 FBXL17Q9UF56 701 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 TLN2Q9Y4G6 2542 aa13.85□□□□□ -0.19
UPF3A-206ENST00000480362 KANTRA0A1W2PQU2 76 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 CRYGCP07315 174 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 CTRB1P17538 263 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 ECSCRQ19T08 205 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 CTRB2Q6GPI1 263 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 TTC9CQ8N5M4 171 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 ZNF114Q8NC26 417 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 OR5T1Q8NG75 326 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 OR1S2Q8NGQ3 325 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 OR5C1Q8NGR4 320 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 PRSS22Q9GZN4 317 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 NPFFR1Q9GZQ6 430 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 WNT10AQ9GZT5 417 aa13.84□□□□□ -0.19
UPF3A-206ENST00000480362 F11RQ9Y624 299 aaKnown RBP13.84□□□□□ -0.19
UPF3A-206ENST00000480362 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 G3V318 75 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 CLDN34H7C241 214 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 TRIM77I1YAP6 450 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 BCL2L11O43521 198 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 CRLF1O75462 422 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 FAM157CP0CG43 387 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 C4BPBP20851 252 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 CRIP2P52943 208 aaPredicted RBP13.83□□□□□ -0.2
UPF3A-206ENST00000480362 MFAP2P55001 183 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 HBG1P69891 147 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 HBG2P69892 147 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 SLC38A11Q08AI6 406 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 AKIRIN2Q53H80 203 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 OR1P1Q8NH06 330 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 TMEM68Q96MH6 324 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 ARPC5LQ9BPX5 153 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 WFDC1Q9HC57 220 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 LINC00527Q9UJ94 153 aa13.83□□□□□ -0.2
UPF3A-206ENST00000480362 ANK3Q12955 4377 aaKnown RBP13.82□□□□□ -0.2
UPF3A-206ENST00000480362 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 TAAR5O14804 337 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 FBXO24O75426 580 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 SCAF4O95104 1147 aaKnown RBP13.82□□□□□ -0.2
UPF3A-206ENST00000480362 IGF1P05019 195 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 DEFA4P12838 97 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 HILS1P60008 231 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 CLINT1Q14677 625 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 PVRIGQ6DKI7 326 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 SLC25A24Q6NUK1 477 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 STPG2Q8N412 459 aa13.82□□□□□ -0.2
UPF3A-206ENST00000480362 PINX1Q96BK5 328 aaKnown RBP13.82□□□□□ -0.2
UPF3A-206ENST00000480362 SONP18583 2426 aaKnown RBP13.82□□□□□ -0.2
UPF3A-206ENST00000480362 HIVEP2P31629 2446 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 PRSS46E5RG02 174 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 AP4M1O00189 453 aa13.81□□□□□ -0.2
UPF3A-206ENST00000480362 ATP6V1FQ16864 119 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms