RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 NMSQ5H8A3 153 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 FAM219AQ8IW50 185 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 CADM3Q8N126 398 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 COMMD1Q8N668 190 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 LRTM2Q8N967 370 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 OR5B3Q8NH48 314 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 OR1S1Q8NH92 325 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 ZNF431Q8TF32 576 aaPredicted RBP7.03□□□□□ -1.28
VCP-206ENST00000480327 TMEM68Q96MH6 324 aa7.03□□□□□ -1.28
VCP-206ENST00000480327 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.03□□□□□ -1.28
VCP-206ENST00000480327 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 NPIPB5A8MRT5 1133 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 MPTX1A8MV57 137 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 FAM25EA8MYX2 175 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 CCSO14618 274 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 OR2J3O76001 311 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 FGF2P09038 288 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 CD33P20138 364 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 HOXA1P49639 335 aaPredicted RBP7.02□□□□□ -1.29
VCP-206ENST00000480327 RPL23AP62750 156 aaKnown RBP7.02□□□□□ -1.29
VCP-206ENST00000480327 PRCDQ00LT1 54 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 EGFEM1PQ0D2K5 195 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 SMCO1Q147U7 214 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 DEFB136Q30KP8 78 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 THOC7Q6I9Y2 204 aaKnown RBP7.02□□□□□ -1.29
VCP-206ENST00000480327 ETV3LQ6ZN32 361 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 C8orf86Q6ZUL3 223 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 ZNF429Q86V71 674 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 C12orf45Q8N5I9 185 aaPredicted RBP7.02□□□□□ -1.29
VCP-206ENST00000480327 ZNF491Q8N8L2 437 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 KLHL30-AS1Q8NEE0 82 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 MITD1Q8WV92 249 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 DUX3Q96PT4 197 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 MARVELD1Q9BSK0 173 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 GNB4Q9HAV0 340 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 PLEKHA3Q9HB20 300 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 PALMDQ9NP74 551 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 ZNF257Q9Y2Q1 563 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 TMED3Q9Y3Q3 217 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 S4R3C0 116 aa7.02□□□□□ -1.29
VCP-206ENST00000480327 BIRC6Q9NR09 4857 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 A0A1B0GU03 582 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 C13orf42A0A1B0GVH6 325 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 DUXBA0A1W2PPF3 345 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 CEBPZOSA8MTT3 80 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 PTTG1O95997 202 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 DHFRP00374 187 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 IFNA21P01568 189 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 IL5P05113 134 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 CRYGCP07315 174 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 CTRB1P17538 263 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 HOXD3P31249 432 aaPredicted RBP7.01□□□□□ -1.29
VCP-206ENST00000480327 RHOGP84095 191 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 KIAA0141Q14154 515 aaPredicted RBP7.01□□□□□ -1.29
VCP-206ENST00000480327 RGS21Q2M5E4 152 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 CTRB2Q6GPI1 263 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 SLC25A24Q6NUK1 477 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 RNF152Q8N8N0 203 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 MAGT1Q9H0U3 335 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 GPN1Q9HCN4 374 aaPredicted RBP7.01□□□□□ -1.29
VCP-206ENST00000480327 ENY2Q9NPA8 101 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 ZFP57Q9NU63 452 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 FBXL7Q9UJT9 491 aa7.01□□□□□ -1.29
VCP-206ENST00000480327 IGHV3-21A0A0B4J1V1 117 aa7□□□□□ -1.29
VCP-206ENST00000480327 PIGBOS1A0A0B4J2F0 54 aa7□□□□□ -1.29
VCP-206ENST00000480327 ANKRD34BA5PLL1 514 aa7□□□□□ -1.29
VCP-206ENST00000480327 C5orf51A6NDU8 294 aa7□□□□□ -1.29
VCP-206ENST00000480327 H3BUA1 57 aa7□□□□□ -1.29
VCP-206ENST00000480327 PRAF2O60831 178 aa7□□□□□ -1.29
VCP-206ENST00000480327 NDUFB8O95169 186 aa7□□□□□ -1.29
VCP-206ENST00000480327 SCGB1D2O95969 90 aa7□□□□□ -1.29
VCP-206ENST00000480327 IGHV3-23P01764 117 aa7□□□□□ -1.29
VCP-206ENST00000480327 MFAP2P55001 183 aa7□□□□□ -1.29
VCP-206ENST00000480327 SPCS3P61009 180 aa7□□□□□ -1.29
VCP-206ENST00000480327 ERHP84090 104 aaKnown RBP7□□□□□ -1.29
VCP-206ENST00000480327 ATP5G2Q06055 141 aa7□□□□□ -1.29
VCP-206ENST00000480327 HSD17B13Q7Z5P4 300 aaPredicted RBP7□□□□□ -1.29
VCP-206ENST00000480327 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
VCP-206ENST00000480327 OR2C3Q8N628 320 aa7□□□□□ -1.29
VCP-206ENST00000480327 LINC00482Q8N8I6 264 aa7□□□□□ -1.29
VCP-206ENST00000480327 MYOZ3Q8TDC0 251 aa7□□□□□ -1.29
VCP-206ENST00000480327 OR10C1Q96KK4 312 aa7□□□□□ -1.29
VCP-206ENST00000480327 UBE2E2Q96LR5 201 aa7□□□□□ -1.29
VCP-206ENST00000480327 FANCD2OSQ96PS1 177 aa7□□□□□ -1.29
VCP-206ENST00000480327 P2RX4Q99571 388 aa7□□□□□ -1.29
VCP-206ENST00000480327 LYSTQ99698 3801 aa7□□□□□ -1.29
VCP-206ENST00000480327 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
VCP-206ENST00000480327 RBKSQ9H477 322 aa7□□□□□ -1.29
VCP-206ENST00000480327 SLA2Q9H6Q3 261 aa7□□□□□ -1.29
VCP-206ENST00000480327 HEYLQ9NQ87 328 aaPredicted RBP7□□□□□ -1.29
VCP-206ENST00000480327 GSKIPQ9P0R6 139 aa7□□□□□ -1.29
VCP-206ENST00000480327 DMRT1Q9Y5R6 373 aa7□□□□□ -1.29
VCP-206ENST00000480327 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
VCP-206ENST00000480327 STARD9Q9P2P6 4700 aa6.99□□□□□ -1.29
VCP-206ENST00000480327 IGLV11-55A0A075B6I3 123 aa6.99□□□□□ -1.29
VCP-206ENST00000480327 TRBV9A0A0B4J1U6 114 aa6.99□□□□□ -1.29
VCP-206ENST00000480327 GOSR2O14653 212 aa6.99□□□□□ -1.29
VCP-206ENST00000480327 SSNA1O43805 119 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms