RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 ETV3LQ6ZN32 361 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 NRARPQ7Z6K4 114 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 ZNF114Q8NC26 417 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 OR1L6Q8NGR2 347 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 MITD1Q8WV92 249 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 FANCD2OSQ96PS1 177 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 WNK1Q9H4A3 2382 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 PLEKHA3Q9HB20 300 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 PALMDQ9NP74 551 aa15.3■□□□□ 0.04
LIME1-205ENST00000480139 C13orf42A0A1B0GVH6 325 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 PRH1P02810 166 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 DEFA4P12838 97 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 MYCNOSP40205 109 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 SPCS3P61009 180 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 OR2C3Q8N628 320 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 RAX2Q96IS3 184 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 P2RX4Q99571 388 aa15.29■□□□□ 0.04
LIME1-205ENST00000480139 F11RQ9Y624 299 aaKnown RBP15.29■□□□□ 0.04
LIME1-205ENST00000480139 CCL24O00175 119 aa15.28■□□□□ 0.04
LIME1-205ENST00000480139 PF4P02776 101 aa15.28■□□□□ 0.04
LIME1-205ENST00000480139 FHL3Q13643 280 aa15.28■□□□□ 0.04
LIME1-205ENST00000480139 C19orf35Q6ZS72 473 aa15.28■□□□□ 0.04
LIME1-205ENST00000480139 OR2J3O76001 311 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 ERHP84090 104 aaKnown RBP15.27■□□□□ 0.04
LIME1-205ENST00000480139 ATP5G2Q06055 141 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 FAM209BQ5JX69 171 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 ZNF343Q6P1L6 599 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 OR1P1Q8NH06 330 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 ZNF431Q8TF32 576 aaPredicted RBP15.27■□□□□ 0.04
LIME1-205ENST00000480139 THYN1Q9P016 225 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 HSPB7Q9UBY9 170 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 FBXL7Q9UJT9 491 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 DMRT1Q9Y5R6 373 aa15.27■□□□□ 0.04
LIME1-205ENST00000480139 PITX3O75364 302 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 IGHV3-11P01762 117 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 IL5P05113 134 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 HOXA1P49639 335 aaPredicted RBP15.26■□□□□ 0.03
LIME1-205ENST00000480139 DEFB136Q30KP8 78 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 C15orf32Q32M92 178 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 GGNBP1Q5YKI7 109 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 PLET1Q6UQ28 207 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 OR11H1Q8NG94 326 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 OR52B4Q8NGK2 314 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 OR5B12Q96R08 314 aa15.26■□□□□ 0.03
LIME1-205ENST00000480139 HOXB5P09067 269 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 DEFA5Q01523 94 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 TNFRSF9Q07011 255 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 ZNF616Q08AN1 781 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 SPINK9Q5DT21 86 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 LINC00482Q8N8I6 264 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 WFDC9Q8NEX5 89 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 OR1N2Q8NGR9 330 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 OR1S1Q8NH92 325 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 MARVELD1Q9BSK0 173 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 ENY2Q9NPA8 101 aa15.25■□□□□ 0.03
LIME1-205ENST00000480139 FAM90A26D6RGX4 464 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 PRAF2O60831 178 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 NDUFB8O95169 186 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 PTTG1O95997 202 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 IFNA21P01568 189 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 HSPB1P04792 205 aaKnown RBP15.24■□□□□ 0.03
LIME1-205ENST00000480139 OR8U8P0C7N1 319 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 MFAP2P55001 183 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 EXOSC2Q13868 293 aaKnown RBP15.24■□□□□ 0.03
LIME1-205ENST00000480139 BSXQ3C1V8 233 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 CXorf58Q96LI9 332 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 SEC22CQ9BRL7 303 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 RANGRFQ9HD47 186 aaPredicted RBP15.24■□□□□ 0.03
LIME1-205ENST00000480139 MGAM2Q2M2H8 2515 aa15.24■□□□□ 0.03
LIME1-205ENST00000480139 INMT-MINDY4F8WBC2 141 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 LINC01619G3V211 115 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 ADAP1O75689 374 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 SNCAP37840 140 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 SLC25A24Q6NUK1 477 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 VN1R17PQ8TDU5 208 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 DPF1Q92782 380 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 DUX3Q96PT4 197 aa15.23■□□□□ 0.03
LIME1-205ENST00000480139 IGHV4OR15-8A0A075B7B6 117 aa15.22■□□□□ 0.03
LIME1-205ENST00000480139 A0A087WW49 117 aa15.22■□□□□ 0.03
LIME1-205ENST00000480139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.22■□□□□ 0.03
LIME1-205ENST00000480139 SUB1P53999 127 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIME1-205ENST00000480139 EEF1AKMT3Q96AZ1 226 aa15.22■□□□□ 0.03
LIME1-205ENST00000480139 ATP6V0BQ99437 205 aa15.22■□□□□ 0.03
LIME1-205ENST00000480139 GPN1Q9HCN4 374 aaPredicted RBP15.22■□□□□ 0.03
LIME1-205ENST00000480139 PEF1Q9UBV8 284 aaKnown RBP15.22■□□□□ 0.03
LIME1-205ENST00000480139 TRBV7-1A0A0A6YYK4 115 aa15.21■□□□□ 0.03
LIME1-205ENST00000480139 CEBPZOSA8MTT3 80 aa15.21■□□□□ 0.03
LIME1-205ENST00000480139 SNRPGP15A8MWD9 76 aa15.21■□□□□ 0.03
LIME1-205ENST00000480139 RNASE2P10153 161 aaKnown RBP15.21■□□□□ 0.03
LIME1-205ENST00000480139 HTR2BP41595 481 aa15.21■□□□□ 0.03
LIME1-205ENST00000480139 DCTN2Q13561 401 aaKnown RBP15.21■□□□□ 0.03
LIME1-205ENST00000480139 C12orf45Q8N5I9 185 aaPredicted RBP15.21■□□□□ 0.03
LIME1-205ENST00000480139 HIPK2Q9H2X6 1198 aa15.21■□□□□ 0.03
LIME1-205ENST00000480139 HEYLQ9NQ87 328 aaPredicted RBP15.21■□□□□ 0.03
LIME1-205ENST00000480139 MFSD2BA6NFX1 497 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 CORTO00230 105 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 CD33P20138 364 aa15.2■□□□□ 0.02
LIME1-205ENST00000480139 ZP3P21754 424 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms