RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SLC25A16P16260 332 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 SAA4P35542 130 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 COMPP49747 757 aaPredicted RBP11.53□□□□□ -0.56
CLDN18-203ENST00000479660 COMMD1Q8N668 190 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLDN18-203ENST00000479660 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 NPBQ8NG41 125 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 TMEM231Q9H6L2 316 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 TREM1Q9NP99 234 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 PTPN13Q12923 2485 aa11.53□□□□□ -0.56
CLDN18-203ENST00000479660 NBPF19A0A087WUL8 3843 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 NPFFO15130 113 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 MSMBP08118 114 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 ACSM6Q6P461 480 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 MRPL41Q8IXM3 137 aaKnown RBP11.52□□□□□ -0.56
CLDN18-203ENST00000479660 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 LFNGQ8NES3 379 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 AJUBAQ96IF1 538 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 FAM96BQ9Y3D0 163 aa11.52□□□□□ -0.56
CLDN18-203ENST00000479660 IGLC7A0M8Q6 106 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 FNDC10F2Z333 226 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 NDUFA3O95167 84 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 MBP02144 154 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 REG1AP05451 166 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 FBLN7Q53RD9 439 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 P2RX4Q99571 388 aa11.52□□□□□ -0.57
CLDN18-203ENST00000479660 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
CLDN18-203ENST00000479660 CENPEQ02224 2701 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 DOPEY2Q9Y3R5 2298 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 B4DSR2 109 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 CNIH1O95406 144 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 APELAP0DMC3 54 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 RAB2AP61019 212 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 CCL20P78556 96 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 EBI3Q14213 229 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 MLANAQ16655 118 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 RPP25LQ8N5L8 163 aaKnown RBP11.51□□□□□ -0.57
CLDN18-203ENST00000479660 SRSF12Q8WXF0 261 aaKnown RBP11.51□□□□□ -0.57
CLDN18-203ENST00000479660 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 MGST2Q99735 147 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 CSMD1Q96PZ7 3565 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
CLDN18-203ENST00000479660 ANKRD17O75179 2603 aaKnown RBP11.51□□□□□ -0.57
CLDN18-203ENST00000479660 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 BTBD17A6NE02 478 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 NCBP2LA6PVI3 153 aaKnown RBP11.5□□□□□ -0.57
CLDN18-203ENST00000479660 HBE1P02100 147 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 CD5P06127 495 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 FAM106CPP0CH98 169 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 TMEM11P17152 192 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 BRS3P32247 399 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 SSBP2P81877 361 aaPredicted RBP11.5□□□□□ -0.57
CLDN18-203ENST00000479660 CD69Q07108 199 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 ZNF726P1Q15940 193 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 GUK1Q16774 197 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
CLDN18-203ENST00000479660 EIF5A2Q9GZV4 153 aaKnown RBP11.5□□□□□ -0.57
CLDN18-203ENST00000479660 C7orf69Q9H7B7 122 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 BEX4Q9NWD9 120 aaPredicted RBP11.5□□□□□ -0.57
CLDN18-203ENST00000479660 POLQO75417 2590 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 AREGP15514 252 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 OPRK1P41145 380 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 RAB31Q13636 194 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 GAMTQ14353 236 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 Q8N6K4 173 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 OR10G4Q8NGN3 311 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 OR10G9Q8NGN4 311 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 OR10G7Q8NGN6 311 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 RNASEH2CQ8TDP1 164 aaKnown RBP11.5□□□□□ -0.57
CLDN18-203ENST00000479660 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 GGTLC1Q9BX51 225 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 HIF1ANQ9NWT6 349 aa11.5□□□□□ -0.57
CLDN18-203ENST00000479660 ZFHX3Q15911 3703 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
CLDN18-203ENST00000479660 TRAV1-1A0A0B4J248 108 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 TRAV40A0A0B4J280 105 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 SOX15O60248 233 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 M6PRP20645 277 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
CLDN18-203ENST00000479660 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 SSX7Q7RTT5 188 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 TMEM144Q7Z5S9 345 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 PBDC1Q9BVG4 233 aa11.49□□□□□ -0.57
CLDN18-203ENST00000479660 ACOT6Q3I5F7 207 aaPredicted RBP11.48□□□□□ -0.57
CLDN18-203ENST00000479660 FAM120AOSQ5T036 256 aa11.48□□□□□ -0.57
CLDN18-203ENST00000479660 CCDC28AQ8IWP9 274 aa11.48□□□□□ -0.57
CLDN18-203ENST00000479660 ZNF114Q8NC26 417 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms