RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
COL16A1-211ENST00000479100 PLEKHA3Q9HB20 300 aa11.81□□□□□ -0.52
COL16A1-211ENST00000479100 ENY2Q9NPA8 101 aa11.81□□□□□ -0.52
COL16A1-211ENST00000479100 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 HOXA1P49639 335 aaPredicted RBP11.8□□□□□ -0.52
COL16A1-211ENST00000479100 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 SMCO1Q147U7 214 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 NMSQ5H8A3 153 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 SLC25A24Q6NUK1 477 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 OR1S1Q8NH92 325 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 SEC22CQ9BRL7 303 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 ALX4Q9H161 411 aaPredicted RBP11.8□□□□□ -0.52
COL16A1-211ENST00000479100 FBXL7Q9UJT9 491 aa11.8□□□□□ -0.52
COL16A1-211ENST00000479100 ANKRD34BA5PLL1 514 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 CYB5BO43169 146 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 BRI3O95415 125 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 DUS4LO95620 317 aaKnown RBP11.79□□□□□ -0.52
COL16A1-211ENST00000479100 HIST1H1BP16401 226 aaKnown RBP11.79□□□□□ -0.52
COL16A1-211ENST00000479100 SPCS3P61009 180 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 ERHP84090 104 aaKnown RBP11.79□□□□□ -0.52
COL16A1-211ENST00000479100 GGNBP1Q5YKI7 109 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 UXS1Q8NBZ7 420 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 DPF1Q92782 380 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 TMED3Q9Y3Q3 217 aa11.79□□□□□ -0.52
COL16A1-211ENST00000479100 TRBV9A0A0B4J1U6 114 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 A0A1B0GU03 582 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 FAM223BA6NKX1 122 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 CEBPZOSA8MTT3 80 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 I3L521 148 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 CCL24O00175 119 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 ADAP1O75689 374 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 NDUFB8O95169 186 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 IFNA21P01568 189 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
COL16A1-211ENST00000479100 SNCAP37840 140 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 MYCNOSP40205 109 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
COL16A1-211ENST00000479100 FAM223AQ8IWN6 122 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 NECAP1Q8NC96 275 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 OR1N2Q8NGR9 330 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 FANCD2OSQ96PS1 177 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 S4R3C0 116 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 TGP01266 2768 aa11.78□□□□□ -0.52
COL16A1-211ENST00000479100 INMT-MINDY4F8WBC2 141 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 ETV3LQ6ZN32 361 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 OR2C3Q8N628 320 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 OR11H1Q8NG94 326 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 OR52E5Q8NH55 327 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 ZNF431Q8TF32 576 aaPredicted RBP11.77□□□□□ -0.53
COL16A1-211ENST00000479100 MITD1Q8WV92 249 aa11.77□□□□□ -0.53
COL16A1-211ENST00000479100 HEYLQ9NQ87 328 aaPredicted RBP11.77□□□□□ -0.53
COL16A1-211ENST00000479100 F11RQ9Y624 299 aaKnown RBP11.77□□□□□ -0.53
COL16A1-211ENST00000479100 IGLV11-55A0A075B6I3 123 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 SPNP16150 400 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 RUNX1Q01196 453 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 AARDQ4LEZ3 155 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 C12orf45Q8N5I9 185 aaPredicted RBP11.76□□□□□ -0.53
COL16A1-211ENST00000479100 P2RX4Q99571 388 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 THYN1Q9P016 225 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 CACFD1Q9UGQ2 172 aa11.76□□□□□ -0.53
COL16A1-211ENST00000479100 IGHV4OR15-8A0A075B7B6 117 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 A0A087WW49 117 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 IL5P05113 134 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 CD33P20138 364 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 MFAP2P55001 183 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 TNFRSF9Q07011 255 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 ZNF616Q08AN1 781 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 OR1L6Q8NGR2 347 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 MISP3Q96FF7 219 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 RBKSQ9H477 322 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 GPN1Q9HCN4 374 aaPredicted RBP11.75□□□□□ -0.53
COL16A1-211ENST00000479100 DMRT1Q9Y5R6 373 aa11.75□□□□□ -0.53
COL16A1-211ENST00000479100 MPTX1A8MV57 137 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 FAM25EA8MYX2 175 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 LINC01619G3V211 115 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 HSPB1P04792 205 aaKnown RBP11.74□□□□□ -0.53
COL16A1-211ENST00000479100 SLC25A6P12236 298 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL16A1-211ENST00000479100 LINC00482Q8N8I6 264 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 HIPK2Q9H2X6 1198 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 RANGRFQ9HD47 186 aaPredicted RBP11.74□□□□□ -0.53
COL16A1-211ENST00000479100 PALMDQ9NP74 551 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 PEF1Q9UBV8 284 aaKnown RBP11.74□□□□□ -0.53
COL16A1-211ENST00000479100 HSPB7Q9UBY9 170 aa11.74□□□□□ -0.53
COL16A1-211ENST00000479100 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
COL16A1-211ENST00000479100 CCSO14618 274 aa11.73□□□□□ -0.53
COL16A1-211ENST00000479100 PRAF2O60831 178 aa11.73□□□□□ -0.53
COL16A1-211ENST00000479100 PITX3O75364 302 aa11.73□□□□□ -0.53
COL16A1-211ENST00000479100 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
COL16A1-211ENST00000479100 OR8U8P0C7N1 319 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms