RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 PBDC1Q9BVG4 233 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 CLEC7AQ9BXN2 247 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 BPESC1Q9GZL8 116 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 PLEKHA3Q9HB20 300 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 LPAR2Q9HBW0 351 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 ENY2Q9NPA8 101 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 SLC39A9Q9NUM3 307 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 PRNDQ9UKY0 176 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 ZNF257Q9Y2Q1 563 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 CARHSP1Q9Y2V2 147 aaKnown RBP3.33□□□□□ -1.88
USP25-208ENST00000478932 WASHC3Q9Y3C0 194 aa3.33□□□□□ -1.88
USP25-208ENST00000478932 PUS1Q9Y606 427 aaKnown RBP eCLIP3.33□□□□□ -1.88
USP25-208ENST00000478932 PRRC2AP48634 2157 aaKnown RBP3.33□□□□□ -1.88
USP25-208ENST00000478932 IGKV1OR2-108A0A075B7D4 117 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 IGHV1-3A0A0C4DH29 117 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 hCG_1809904A0A1W2PP81 198 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 A0A1W2PPE2 198 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 A0A1W2PR64 198 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 A0A1W2PRV1 198 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 MAP1LC3B2A6NCE7 125 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 CGB1A6NKQ9 187 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 DNASE2O00115 360 aaPredicted RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 FCN1O00602 326 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 SOX15O60248 233 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 FSTL3O95633 263 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 IGLV2-23P01705 113 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 GATA2P23769 480 aaPredicted RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 MC5RP33032 325 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 RAB13P51153 203 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 ZNF137PP52743 207 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 EFNA4P52798 201 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 RPP30P78346 268 aaKnown RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 VWC2Q2TAL6 325 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 TMEM177Q53S58 311 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 TMEM41BQ5BJD5 291 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 C19orf35Q6ZS72 473 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 CENPVQ7Z7K6 275 aaPredicted RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 PDPNQ86YL7 162 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 COMMD1Q8N668 190 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 C8orf31Q8N9H6 132 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 LFNGQ8NES3 379 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 OR5B3Q8NH48 314 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 CLDND2Q8NHS1 167 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 ZNF596Q8TC21 504 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 GATAD1Q8WUU5 269 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 C17orf50Q8WW18 174 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 NRGNQ92686 78 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 RPEQ96AT9 228 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 PCGF1Q9BSM1 259 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 MAP1LC3BQ9GZQ8 125 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 SEPSECSQ9HD40 501 aaKnown RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 NDUFA4L2Q9NRX3 87 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 BET1LQ9NYM9 111 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 KIAA1456Q9P272 454 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 WDR83OSQ9Y284 106 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 TRAV1-1A0A0B4J248 108 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 A0A1W2PPH5 198 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 M0R036 132 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 TIMM23O14925 209 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 ACTL6BO94805 426 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 SNAPINO95295 136 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 SNRNP70P08621 437 aaKnown RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 USF1P22415 310 aaPredicted RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 LORP23490 312 aaPredicted RBP3.32□□□□□ -1.88
USP25-208ENST00000478932 LGALS4P56470 323 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 RAB11AP62491 216 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 GNB1P62873 340 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 ICAM4Q14773 271 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 MRGPRG-AS1Q2M3A8 158 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 MIC13Q5XKP0 118 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 HCP5Q6MZN7 132 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 FAM122CQ6P4D5 195 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 TEPPQ6URK8 271 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 CLRN3Q8NCR9 226 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 LY6G5BQ8NDX9 201 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 OR1L8Q8NGR8 309 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 C8orf46Q8TAG6 207 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 MBD3L1Q8WWY6 194 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 ISOC2Q96AB3 205 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 MGST2Q99735 147 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 NPVFQ9HCQ7 196 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 FKBP11Q9NYL4 201 aa3.32□□□□□ -1.88
USP25-208ENST00000478932 C7orf77A4D0Y5 90 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 BTBD17A6NE02 478 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 LY6LH3BQJ8 138 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 YIF1AO95070 293 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 SCAF4O95104 1147 aaKnown RBP3.31□□□□□ -1.88
USP25-208ENST00000478932 HBE1P02100 147 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 AREGP15514 252 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 ATF4P18848 351 aaPredicted RBP3.31□□□□□ -1.88
USP25-208ENST00000478932 HTR1DP28221 377 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 LGALS7P47929 136 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 GAMTQ14353 236 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 FBLN7Q53RD9 439 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 RUSC1-AS1Q66K80 236 aa3.31□□□□□ -1.88
USP25-208ENST00000478932 DPPA3Q6W0C5 159 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms