RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FOXE1O00358 373 aaPredicted RBP2.96□□□□□ -1.94
CCDC171-207ENST00000478913 RNF13O43567 381 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CHST1O43916 411 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 GATBO75879 557 aaKnown RBP2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SCO1O75880 301 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SOX14O95416 240 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 C6orf47O95873 294 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 IGLV2-23P01705 113 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 IL5P05113 134 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CCR7P32248 378 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 RPL35P42766 123 aaKnown RBP2.96□□□□□ -1.94
CCDC171-207ENST00000478913 PRLHRP49683 370 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 ATP5IP56385 69 aaPredicted RBP2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SEC61GP60059 68 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 HOXC5Q00444 222 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 FABP5Q01469 135 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 TGM3Q08188 693 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SLAQ13239 276 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 HMGN3Q15651 99 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 RSPO1Q2MKA7 263 aaPredicted RBP2.96□□□□□ -1.94
CCDC171-207ENST00000478913 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CDNFQ49AH0 187 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 Q5BKY6 102 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 C9orf135Q5VTT2 229 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 LAMTOR1Q6IAA8 161 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 LPCAT3Q6P1A2 487 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SFXN4Q6P4A7 337 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CD200R1LQ6Q8B3 271 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 DEGS2Q6QHC5 323 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 MBOAT1Q6ZNC8 495 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 FAM122BQ7Z309 247 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CLECL1Q8IZS7 167 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 ACBD7Q8N6N7 88 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 OR4M1Q8NGD0 313 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 OR8D4Q8NGM9 314 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 OR10D3Q8NH80 312 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 STOML3Q8TAV4 291 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CD300LFQ8TDQ1 290 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 MAL2Q969L2 176 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 ARL11Q969Q4 196 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SLC35G5Q96KT7 338 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 PRRC1Q96M27 445 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 RBP7Q96R05 134 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF251Q9BRH9 671 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SEC22CQ9BRL7 303 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 MFFQ9GZY8 342 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 PCBD2Q9H0N5 130 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 NOX3Q9HBY0 568 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 SIRT7Q9NRC8 400 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 BABAM2Q9NXR7 383 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 TAS2R5Q9NYW4 299 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 CLEC2DQ9UHP7 191 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 HEATR1Q9H583 2144 aaKnown RBP2.96□□□□□ -1.94
CCDC171-207ENST00000478913 TNCP24821 2201 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 DSPPQ9NZW4 1301 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 KCNE1BA0A087WTH5 132 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 TRAV1-2A0A0B4J238 106 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR2AT4A6NND4 320 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 IQCF5A8MTL0 148 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 GABARAPH6UMI1 98 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ARPC5O15511 151 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 SGCEO43556 437 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 RBBP9O75884 186 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR2F2O95006 317 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ETHE1O95571 254 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 CSTAP01040 98 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 BGLAPP02818 100 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 MT-ND4P03905 459 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 RLN2P04090 185 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 BCHEP06276 602 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 UCHL1P09936 223 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ATP1B2P14415 290 aaPredicted RBP2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF250P15622 560 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OMPP47874 163 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 RAB5CP51148 216 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ACTBP60709 375 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 RAB4BP61018 213 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 RAB2AP61019 212 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 POLR2GP62487 172 aaKnown RBP eCLIP2.95□□□□□ -1.94
CCDC171-207ENST00000478913 TSPAN31Q12999 210 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR2F1Q13607 317 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 C18orf21Q32NC0 220 aaPredicted RBP2.95□□□□□ -1.94
CCDC171-207ENST00000478913 LGALSLQ3ZCW2 172 aaPredicted RBP2.95□□□□□ -1.94
CCDC171-207ENST00000478913 PABPC1L2AQ5JQF8 200 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM69Q5SWH9 247 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 AGTRAPQ6RW13 159 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ARL9Q6T311 187 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF322Q6U7Q0 402 aaPredicted RBP2.95□□□□□ -1.94
CCDC171-207ENST00000478913 LYPD2Q6UXB3 125 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 H2BFWTQ7Z2G1 175 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 VN1R4Q7Z5H5 301 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 LRP11Q86VZ4 500 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 H1FOOQ8IZA3 346 aaPredicted RBP2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR11H7Q8NGC8 314 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR4K5Q8NGD3 323 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR4X2Q8NGF9 303 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR10K1Q8NGX5 313 aa2.95□□□□□ -1.94
CCDC171-207ENST00000478913 OR2G2Q8NGZ5 317 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms